RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 INVSQ9Y283 1065 aa11.09□□□□□ -0.63
GCM1-201ENST00000259803 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 PRR5-ARHGAP8B1AHC4 643 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 hCG_2039718K7EN88 272 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 CLOCKO15516 846 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 MX2P20592 715 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 GDI1P31150 447 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 OCRLQ01968 901 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 OCA2Q04671 838 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 MIGA2Q7L4E1 593 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 OTOP3Q7RTS5 596 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 COMTD1Q86VU5 262 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 DNAAF5Q86Y56 855 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 TCAIMQ8N3R3 496 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 ENDOVQ8N8Q3 282 aaKnown RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 ZDHHC15Q96MV8 337 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 USP28Q96RU2 1077 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 TCF25Q9BQ70 676 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 LSG1Q9H089 658 aaKnown RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.64
GCM1-201ENST00000259803 TMEM245Q9H330 911 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 PCDHGB7Q9Y5F8 929 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 ADM5C9JUS6 153 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 USP17L21D6R901 530 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 H7C1D1 291 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 RB1P06400 928 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 RPS17P08708 135 aaKnown RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 POU3F3P20264 500 aaPredicted RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 EPHX2P34913 555 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 KCNJ5P48544 419 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 AIF1P55008 147 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 GPX6P59796 221 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 AP3B2Q13367 1082 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 TTMPQ5BVD1 217 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 PLEKHA7Q6IQ23 1121 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 NUP54Q7Z3B4 507 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 DCP2Q8IU60 420 aaKnown RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 KSR1Q8IVT5 923 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 SCUBE3Q8IX30 993 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 FAM26EQ8N5C1 309 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 CPLX3Q8WVH0 158 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 PRCCQ92733 491 aaPredicted RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 MAP6Q96JE9 813 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 PI4K2AQ9BTU6 479 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 KLHL25Q9H0H3 589 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 DCP1AQ9NPI6 582 aaPredicted RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 CPNE7Q9UBL6 633 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 NUP50Q9UKX7 468 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 SMG5Q9UPR3 1016 aaKnown RBP11.08□□□□□ -0.64
GCM1-201ENST00000259803 PIAS3Q9Y6X2 628 aa11.08□□□□□ -0.64
GCM1-201ENST00000259803 TRAF5O00463 557 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 GABBR2O75899 941 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 F2P00734 622 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 ASGR1P07306 291 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 THEGLP0DJG4 465 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 ESRRAP11474 423 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 ALDH1A3P47895 512 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 UBE2IP63279 158 aaKnown RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 GUCY1A3Q02108 690 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 KCNC4Q03721 635 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 SNTA1Q13424 505 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 CHST3Q7LGC8 479 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 NET1Q7Z628 596 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 ZSCAN29Q8IWY8 852 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 RUBCNQ92622 972 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 OMA1Q96E52 524 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 WNT8AQ9H1J5 351 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 KIAA1586Q9HCI6 787 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 ARHGAP28Q9P2N2 729 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 ZNF70Q9UC06 446 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 GINS2Q9Y248 185 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 DICER1Q9UPY3 1922 aaKnown RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 FLT1P17948 1338 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 LYNP07948 512 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 FAM228BP0C875 321 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 TPBGLP0DKB5 382 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 LMOD1P29536 600 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 POLR2BP30876 1174 aaKnown RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 SLCO1A2P46721 670 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 CARD18P57730 90 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 KCNJ10P78508 379 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 ECT2LQ008S8 904 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 XKR9Q5GH70 373 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 CDR2LQ86X02 465 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 FBXL6Q8N531 539 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 POMGNT1Q8WZA1 660 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 DPF2Q92785 391 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 SLC29A1Q99808 456 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 TMEM60Q9H2L4 133 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 RPRD1BQ9NQG5 326 aaKnown RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 FAM105AQ9NUU6 356 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.07□□□□□ -0.64
GCM1-201ENST00000259803 SNX6Q9UNH7 406 aa11.07□□□□□ -0.64
GCM1-201ENST00000259803 DIMT1Q9UNQ2 313 aaKnown RBP11.07□□□□□ -0.64
GCM1-201ENST00000259803 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms