RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PPP4R4Q6NUP7 873 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 PTCHD4Q6ZW05 846 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 YTHDF3Q7Z739 585 aaKnown RBP5.78□□□□□ -1.48
TRA2B-201ENST00000259043 GALNT4Q8N4A0 578 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 SIRT6Q8N6T7 355 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 LINC01465Q8N7H1 131 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 MMS19Q96T76 1030 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 BTBD1Q9H0C5 482 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 LPAR3Q9UBY5 353 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 BTBD3Q9Y2F9 522 aa5.78□□□□□ -1.48
TRA2B-201ENST00000259043 CDC42BPGQ6DT37 1551 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 F8W8V4 182 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 MGEA5O60502 916 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 PIAS2O75928 621 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 KELP23276 732 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 ALDH5A1P51649 535 aaPredicted RBP5.77□□□□□ -1.49
TRA2B-201ENST00000259043 ITGA8P53708 1063 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 LMAN2Q12907 356 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 BIRC2Q13490 618 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 UBE4AQ14139 1066 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 SLC29A2Q14542 456 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 MAP9Q49MG5 647 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 SLC18B1Q6NT16 456 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 UNC13DQ70J99 1090 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 DGKHQ86XP1 1220 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 MORC4Q8TE76 937 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 TIFAQ96CG3 184 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 ARNT2Q9HBZ2 717 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 TRIM36Q9NQ86 728 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 DDX21Q9NR30 783 aaKnown RBP eCLIP5.77□□□□□ -1.49
TRA2B-201ENST00000259043 VPS51Q9UID3 782 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 HDAC9Q9UKV0 1011 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 USP22Q9UPT9 525 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 RIPOR2Q9Y4F9 1068 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 PCDHGB6Q9Y5F9 930 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 KIF1AQ12756 1690 aa5.77□□□□□ -1.49
TRA2B-201ENST00000259043 KIF1BO60333 1816 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 RREB1Q92766 1687 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 DISP2A7MBM2 1401 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 RAB27BO00194 218 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 PSMD9O00233 223 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 TP73O15350 636 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 RGS10O43665 173 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 CHRM5P08912 532 aaPredicted RBP5.76□□□□□ -1.49
TRA2B-201ENST00000259043 CYP2A6P11509 494 aaPredicted RBP5.76□□□□□ -1.49
TRA2B-201ENST00000259043 HOXB6P17509 224 aaKnown RBP5.76□□□□□ -1.49
TRA2B-201ENST00000259043 DIO1P49895 249 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 RHBDL3P58872 404 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 SUMO2P61956 95 aaKnown RBP5.76□□□□□ -1.49
TRA2B-201ENST00000259043 PLAG1Q6DJT9 500 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 C11orf87Q6NUJ2 197 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 KRT27Q7Z3Y8 459 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 RAB11FIP4Q86YS3 637 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 KRT78Q8N1N4 520 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 GALNT16Q8N428 558 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 ZC3H10Q96K80 434 aaKnown RBP5.76□□□□□ -1.49
TRA2B-201ENST00000259043 C5orf34Q96MH7 638 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 RIMKLBQ9ULI2 386 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 CLTCL1P53675 1640 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 NRAPQ86VF7 1730 aa5.76□□□□□ -1.49
TRA2B-201ENST00000259043 NPHP3Q7Z494 1330 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 NUP188Q5SRE5 1749 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 CES2O00748 559 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 MT-ND5P03915 603 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 PARP1P09874 1014 aaKnown RBP5.75□□□□□ -1.49
TRA2B-201ENST00000259043 APEHP13798 732 aaKnown RBP5.75□□□□□ -1.49
TRA2B-201ENST00000259043 RPL17P18621 184 aaKnown RBP5.75□□□□□ -1.49
TRA2B-201ENST00000259043 IL1R2P27930 398 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 CARSP49589 748 aaKnown RBP5.75□□□□□ -1.49
TRA2B-201ENST00000259043 GATMP50440 423 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 PGDP52209 483 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 KLF9Q13886 244 aaPredicted RBP5.75□□□□□ -1.49
TRA2B-201ENST00000259043 DAZAP2Q15038 168 aaPredicted RBP5.75□□□□□ -1.49
TRA2B-201ENST00000259043 BRD3Q15059 726 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 MORN5Q5VZ52 161 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 KSR2Q6VAB6 950 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 USP49Q70CQ1 688 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 CERS3Q8IU89 383 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 YAF2Q8IY57 180 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 METTL25Q8N6Q8 603 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 ZNF398Q8TD17 642 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 RPS6KC1Q96S38 1066 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 SELENOOQ9BVL4 669 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 ZNF700Q9H0M5 742 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 FAM83DQ9H4H8 585 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 PDGFCQ9NRA1 345 aa5.75□□□□□ -1.49
TRA2B-201ENST00000259043 CHD4Q14839 1912 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 CYP2D7A0A087X1C5 515 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 SMIM35A0A1B0GVV1 85 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 AQP7P3A6NL99 342 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 EXOC5O00471 708 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 KCNAB3O43448 404 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 EIF3JO75822 258 aaKnown RBP5.74□□□□□ -1.49
TRA2B-201ENST00000259043 A1BGP04217 495 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 ATF7P17544 494 aaPredicted RBP5.74□□□□□ -1.49
TRA2B-201ENST00000259043 TPH1P17752 444 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 MCM5P33992 734 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 KCNAB1Q14722 419 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 FAM187BQ17R55 369 aa5.74□□□□□ -1.49
TRA2B-201ENST00000259043 ADAMTS18Q8TE60 1221 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms