RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 ENPP2Q13822 863 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 KIAA1211LQ6NV74 962 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 CYFIP2Q96F07 1278 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 FAXDC2Q96IV6 333 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 DUSP16Q9BY84 665 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 IMPG2Q9BZV3 1241 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 NACA2Q9H009 215 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 TMEM8AQ9HCN3 771 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 DNMT3LQ9UJW3 386 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 LSM7Q9UK45 103 aaKnown RBP10.85□□□□□ -0.67
VPS50-201ENST00000251739 SLC27A6Q9Y2P4 619 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 NBEAQ8NFP9 2946 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 LAMA5O15230 3695 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 ATXN2Q99700 1313 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 FASNP49327 2511 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 A0A1W2PQ27 194 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 A0A1W2PQ64 194 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 A0A1W2PQD8 194 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 GFRA2O00451 464 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 AP5Z1O43299 807 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 CLSTN1O94985 981 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 KIF20AO95235 890 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 HSP90AA1P07900 732 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 SERPINF2P08697 491 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 CD58P19256 250 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 GTF2H1P32780 548 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 WASP42768 502 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 SYKP43405 635 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 PLA2G4AP47712 749 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 DGKGP49619 791 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 RPL6Q02878 288 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 GOLGA8FQ08AF8 430 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 GOLGA8DPQ0D2H9 430 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 SEMA3BQ13214 749 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 QPCTQ16769 361 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 RAB41Q5JT25 222 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 C10orf120Q5SQS8 335 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 FYB2Q5VWT5 728 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 SLC36A4Q6YBV0 504 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 KRBA2Q6ZNG9 492 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 TPGS1Q6ZTW0 290 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 SLC41A1Q8IVJ1 513 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 FAM186BQ8IYM0 893 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 RBBP8NLQ8NC74 664 aaPredicted RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 DEFB124Q8NES8 71 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 IPO4Q8TEX9 1081 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 GATA6Q92908 595 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 JAKMIP2Q96AA8 810 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 MRGPRX1Q96LB2 322 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 SPATA32Q96LK8 384 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 XPO6Q96QU8 1125 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 NUSAP1Q9BXS6 441 aaKnown RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 GOLPH3LQ9H4A5 285 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS50-201ENST00000251739 NUDT5Q9UKK9 219 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 TP53BP1Q12888 1972 aaPredicted RBP10.84□□□□□ -0.67
VPS50-201ENST00000251739 BAHCC1Q9P281 2608 aa10.84□□□□□ -0.67
VPS50-201ENST00000251739 NYNRINQ9P2P1 1898 aaKnown RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 C1QTNF9BB2RNN3 333 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 ZNF217O75362 1048 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 TOP3BO95985 862 aaKnown RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 C1QTNF9P0C862 333 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 TRIM21P19474 475 aaKnown RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 PSMC2P35998 433 aaKnown RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 MFAP3P55082 362 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 KRT85P78386 507 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 ZNF33AQ06730 810 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 DUOXA1Q1HG43 343 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 ARHGAP17Q68EM7 881 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 KRT39Q6A163 491 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 UNQ6494/PRO21346Q6UXR6 183 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 BHLHA9Q7RTU4 235 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 FAM217AQ8IXS0 508 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 ZC3H3Q8IXZ2 948 aaKnown RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 PGBD3Q8N328 593 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 SLC4A11Q8NBS3 891 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 CEP76Q8TAP6 659 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 PIWIL1Q96J94 861 aaKnown RBP10.83□□□□□ -0.68
VPS50-201ENST00000251739 ARID3AQ99856 593 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 UBXN6Q9BZV1 441 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 CD93Q9NPY3 652 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 CACNA2D2Q9NY47 1150 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 SLC6A14Q9UN76 642 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 MAPK8IP1Q9UQF2 711 aa10.83□□□□□ -0.68
VPS50-201ENST00000251739 WASH3PC4AMC7 463 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 GJB3O75712 270 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 KRT13P13646 458 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 RPL13P26373 211 aaKnown RBP10.82□□□□□ -0.68
VPS50-201ENST00000251739 MAPK8P45983 427 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 MXI1P50539 228 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 RAD23BP54727 409 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms