RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 PLIN4Q96Q06 1357 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 RGL2O15211 777 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 MAFGO15525 162 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GLRA3O75311 464 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ATP6V1C1P21283 382 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 POTEAQ6S8J7 498 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ZNF786Q8N393 782 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 B4GALNT2Q8NHY0 566 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CPXM1Q96SM3 734 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ELOVL4Q9GZR5 314 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ASCC2Q9H1I8 757 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NRDE2Q9H7Z3 1164 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 SAC3D1A6NKF1 404 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 POLBP06746 335 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ADSSP30520 456 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GTF2A2P52657 109 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 RIPK1Q13546 671 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GRAMD4Q6IC98 578 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GSTCDQ8NEC7 633 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 DTNBP1Q96EV8 351 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 L3MBTL3Q96JM7 780 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 ECSITQ9BQ95 431 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 COPS7BQ9H9Q2 264 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 VTNP04004 478 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CD48P09326 243 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 UBA1P22314 1058 aaKnown RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 NCKAP1LP55160 1127 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 OCA2Q04671 838 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CYLC2Q14093 348 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 GJC2Q5T442 439 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TMTC4Q5T4D3 741 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PDPK2PQ6A1A2 396 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 PTPRN2Q92932 1015 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 CDRT15Q96T59 188 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 FICDQ9BVA6 458 aa4.75□□□□□ -1.65
VPS13C-201ENST00000249837 TCRBV9S1A1TA0A576 114 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 NR5A2O00482 541 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 CYB561D2O14569 222 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ANGPT2O15123 496 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ADIGQ0VDE8 80 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 POU6F1Q14863 301 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 THEM5Q8N1Q8 247 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PCDH20Q8N6Y1 951 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 COLGALT1Q8NBJ5 622 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SH3TC2Q8TF17 1288 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 NMRK1Q9NWW6 199 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ARID1AO14497 2285 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 TCF4P15884 667 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 TBL3Q12788 808 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 DGKDQ16760 1214 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 UGP2Q16851 508 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 BTBD8Q5XKL5 378 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 MON1BQ7L1V2 547 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 OSMRQ99650 979 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 NMUR2Q9GZQ4 415 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SPATC1LQ9H0A9 340 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 A0A096LPK6 155 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PIGNO95427 931 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PSMB4P28070 264 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SKIV2L2P42285 1042 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 MPP3Q13368 585 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SLC39A4Q6P5W5 647 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 TTC7BQ86TV6 843 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 APLFQ8IW19 511 aaPredicted RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 DEFB106AQ8N104 65 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 C12orf50Q8NA57 414 aaPredicted RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SLC44A1Q8WWI5 657 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ACSS3Q9H6R3 686 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SNTG2Q9NY99 539 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 GOLGA8CPA6NN73 597 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 CSPG5O95196 566 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ANPEPP15144 967 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 AKAP5P24588 427 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PPM1FP49593 454 aaPredicted RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SPIRE1Q08AE8 756 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 UBAP2Q5T6F2 1119 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PLEKHA7Q6IQ23 1121 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SLC41A1Q8IVJ1 513 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 CPT1BQ92523 772 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ULK4Q96C45 1275 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 THAP11Q96EK4 314 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SNRNP25Q9BV90 132 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PKD2L2Q9NZM6 624 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 TRIM13O60858 407 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SRP72O76094 671 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 CDKN2BP42772 138 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 ABCE1P61221 599 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 NET1Q7Z628 596 aaPredicted RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 CLNKQ7Z7G1 428 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SLC12A4Q9UP95 1085 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 SNX13Q9Y5W8 968 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 CHADO15335 359 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 RHOBTB1O94844 696 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 TSHRP16473 764 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 GRK2P25098 689 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 HDAC4P56524 1084 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 GBE1Q04446 702 aa4.74□□□□□ -1.65
VPS13C-201ENST00000249837 PAN2Q504Q3 1202 aaKnown RBP4.74□□□□□ -1.65
VPS13C-201ENST00000249837 TEDDM1Q5T9Z0 273 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms