RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 OXNAD1Q96HP4 312 aaPredicted RBP22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 CSPG4P5Q96PW8 444 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 SIRPGQ9P1W8 387 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 MAD1L1Q9Y6D9 718 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 A8MXQ7 604 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 I3L4J1 428 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 CYP2C8P10632 490 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 SERPINB9P50453 376 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 KIZQ2M2Z5 673 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 ATG16L1Q676U5 607 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 ANKRD52Q8NB46 1076 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 MECRQ9BV79 373 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 ADAMTS10Q9H324 1103 aa22.37■■□□□ 1.17
SH2D3A-201ENST00000245908 PDCD11Q14690 1871 aaKnown RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 R3HDM1Q15032 1099 aaKnown RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 C9orf57Q5W0N0 161 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 C4orf50Q6ZRC1 276 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 GPRC5AQ8NFJ5 357 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 RNF217Q8TC41 542 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 KCNV2Q8TDN2 545 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 GTF3C2Q8WUA4 911 aaPredicted RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 TRIM56Q9BRZ2 755 aaKnown RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 EIF2AQ9BY44 585 aaKnown RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 MAGEB5Q9BZ81 275 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 KCNK4Q9NYG8 393 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 FAM237BA0A1B0GVD1 139 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 HMX2A2RU54 273 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 EME2A4GXA9 379 aaPredicted RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 HOXD8P13378 290 aaPredicted RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 GJA5P36382 358 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 BST1Q10588 318 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 NCBP2-AS2Q69YL0 99 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 HEATR6Q6AI08 1181 aaKnown RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 CYS1Q717R9 158 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 CCDC185Q8N715 623 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 C7orf31Q8N865 590 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 TTC8Q8TAM2 541 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 RAB3IL1Q8TBN0 382 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 E2F7Q96AV8 911 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 GCOM2Q9BZD3 368 aaPredicted RBP22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 DTLQ9NZJ0 730 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 USP3Q9Y6I4 520 aa22.36■■□□□ 1.17
SH2D3A-201ENST00000245908 FCHO1O14526 889 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 GSC2O15499 205 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 HCRTO43612 131 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 LMNAP02545 664 aaKnown RBP22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 CCDC130P13994 396 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 CRHR1P34998 444 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 CCNA1P78396 465 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 OCRLQ01968 901 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 TEX44Q53QW1 395 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 ALKAL1Q6UXT8 129 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 CRYBG2Q8N1P7 616 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 MICAL1Q8TDZ2 1067 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 SLC13A1Q9BZW2 595 aa22.35■■□□□ 1.17
SH2D3A-201ENST00000245908 C2orf71A6NGG8 1288 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 ENTPD5O75356 428 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 DGKIO75912 1065 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 ADORA2BP29275 332 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 TMPRSS15P98073 1019 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 CDK18Q07002 472 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 STEAP4Q687X5 459 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 TIFABQ6ZNK6 161 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 STRADAQ7RTN6 431 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 ZNF467Q7Z7K2 595 aaPredicted RBP22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 KBTBD7Q8WVZ9 684 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 OLFM3Q96PB7 478 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 MOCS1Q9NZB8 636 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 HACD1B0YJ81 288 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 MMP3P08254 477 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 LCP1P13796 627 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 GRIA1P42261 906 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 ACADSBP45954 432 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 SNAPC2Q13487 334 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 GLRA4Q5JXX5 417 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 CES4AQ5XG92 561 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 RFWD3Q6PCD5 774 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 CATSPER4Q7RTX7 472 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 TTC7BQ86TV6 843 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 CFAP61Q8NHU2 1237 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 PCMTD2Q9NV79 361 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 GJD2Q9UKL4 321 aa22.34■■□□□ 1.17
SH2D3A-201ENST00000245908 A6NHS1 94 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 GYG2O15488 501 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 SNAI1O95863 264 aaPredicted RBP22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 VAV1P15498 845 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 CNTFP26441 200 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 FDFT1P37268 417 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 CHI3L2Q15782 390 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 MROH9Q5TGP6 573 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 NUDCD3Q8IVD9 361 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 NDUFAF2Q8N183 169 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 DEPDC1BQ8WUY9 529 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 DCLRE1BQ9H816 532 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 UBQLN1Q9UMX0 589 aaKnown RBP22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 HES2Q9Y543 173 aa22.33■■□□□ 1.17
SH2D3A-201ENST00000245908 LRRC42Q9Y546 428 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms