RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 APLP1P51693 650 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 SEC24CP53992 1094 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 NRLP54845 237 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 DSC1Q08554 894 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 SLC10A2Q12908 348 aaPredicted RBP24.09■■□□□ 1.45
MSX2-201ENST00000239243 FOXR1Q6PIV2 292 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 KCNT2Q6UVM3 1135 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 FAM43BQ6ZT52 329 aaPredicted RBP24.09■■□□□ 1.45
MSX2-201ENST00000239243 PALM2Q8IXS6 379 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 FBXO36Q8NEA4 188 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 OR10T2Q8NGX3 314 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 TFB1MQ8WVM0 346 aaKnown RBP24.09■■□□□ 1.45
MSX2-201ENST00000239243 OLFM3Q96PB7 478 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 RABEP2Q9H5N1 569 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 ETNK2Q9NVF9 386 aa24.09■■□□□ 1.45
MSX2-201ENST00000239243 FKTNO75072 461 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 MAP3K6O95382 1288 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 ZNF135P52742 658 aaPredicted RBP24.08■■□□□ 1.45
MSX2-201ENST00000239243 GAD2Q05329 585 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 BBS9Q3SYG4 887 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 VPS52Q8N1B4 723 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 MAGEB5Q9BZ81 275 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 TBK1Q9UHD2 729 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 CENPFP49454 3210 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 C5orf60A6NFR6 353 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 SPAG6O75602 509 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 KLHL38Q2WGJ6 581 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 MSS51Q4VC12 460 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 LRRC8DQ7L1W4 858 aa24.08■■□□□ 1.45
MSX2-201ENST00000239243 ZNF473Q8WTR7 871 aaKnown RBP24.08■■□□□ 1.45
MSX2-201ENST00000239243 EEF2KO00418 725 aaKnown RBP24.07■■□□□ 1.44
MSX2-201ENST00000239243 DGKIO75912 1065 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 ITGB1P05556 798 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 SELPP16109 830 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 GPX6P59796 221 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 CLLU1OSQ5K130 101 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 BEND5Q7L4P6 421 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 SPATS2Q86XZ4 545 aaKnown RBP24.07■■□□□ 1.44
MSX2-201ENST00000239243 SPATA2LQ8IUW3 424 aaPredicted RBP24.07■■□□□ 1.44
MSX2-201ENST00000239243 ATXN2LQ8WWM7 1075 aaKnown RBP24.07■■□□□ 1.44
MSX2-201ENST00000239243 LINC01599Q8WXQ3 324 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 RHOBTB2Q9BYZ6 727 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 CCDC134Q9H6E4 229 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 WDR6Q9NNW5 1121 aaKnown RBP24.07■■□□□ 1.44
MSX2-201ENST00000239243 DDIT4Q9NX09 232 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 SENP1Q9P0U3 644 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 FBXW11Q9UKB1 542 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 CLUHO75153 1309 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 RABGGTBP53611 331 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 TMED2Q15363 201 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 C3orf62Q6ZUJ4 267 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 PDZD4Q76G19 769 aaPredicted RBP24.07■■□□□ 1.44
MSX2-201ENST00000239243 BHLHA9Q7RTU4 235 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 TMLHEQ9NVH6 421 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 TMEM161AQ9NX61 479 aa24.07■■□□□ 1.44
MSX2-201ENST00000239243 DNAH12Q6ZR08 3092 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 POC1B-GALNT4F8VUJ3 575 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 CREB3O43889 395 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 BANF1O75531 89 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 STK10O94804 968 aaKnown RBP24.06■■□□□ 1.44
MSX2-201ENST00000239243 BRAFP15056 766 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 HCAR3P49019 387 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 GEMIN4P57678 1058 aaKnown RBP24.06■■□□□ 1.44
MSX2-201ENST00000239243 BFSP2Q13515 415 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 PAFAH1B3Q15102 231 aaKnown RBP24.06■■□□□ 1.44
MSX2-201ENST00000239243 PDK1Q15118 436 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 RFX8Q6ZV50 586 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 CCDC110Q8TBZ0 833 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 HTR3CQ8WXA8 447 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 FAM193BQ96PV7 902 aaPredicted RBP24.06■■□□□ 1.44
MSX2-201ENST00000239243 ZMYND15Q9H091 742 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.06■■□□□ 1.44
MSX2-201ENST00000239243 RAD54BQ9Y620 910 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 TMEM120BA0PK00 339 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 DDHD2O94830 711 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 CAPN12Q6ZSI9 719 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 LRRTM3Q86VH5 581 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 COLGALT2Q8IYK4 626 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 CYP4X1Q8N118 509 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 MCUQ8NE86 351 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 MAML1Q92585 1016 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 CHMP6Q96FZ7 201 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 ACSS3Q9H6R3 686 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 ELAC1Q9H777 363 aaKnown RBP24.06■■□□□ 1.44
MSX2-201ENST00000239243 PSMC3IPQ9P2W1 217 aaPredicted RBP24.06■■□□□ 1.44
MSX2-201ENST00000239243 RABGEF1Q9UJ41 708 aa24.06■■□□□ 1.44
MSX2-201ENST00000239243 COL4A4P53420 1690 aaPredicted RBP24.05■■□□□ 1.44
MSX2-201ENST00000239243 RASA4BC9J798 803 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 PPP1R12AO14974 1030 aaPredicted RBP24.05■■□□□ 1.44
MSX2-201ENST00000239243 RASA4O43374 803 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 GCAP28676 217 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 PPARDQ03181 441 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 DPYSQ14117 519 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 BSPRYQ5W0U4 402 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 ARHGEF18Q6ZSZ5 1173 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 ZNF280BQ86YH2 543 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 COLEC11Q9BWP8 271 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 ETNK1Q9HBU6 452 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 TBC1D13Q9NVG8 400 aa24.05■■□□□ 1.44
MSX2-201ENST00000239243 PTPRDP23468 1912 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms