RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ADIGQ0VDE8 80 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SETDB1Q15047 1291 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 C17orf99Q6UX52 265 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 TFB1MQ8WVM0 346 aaKnown RBP16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SLC9A7Q96T83 725 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SLC38A7Q9NVC3 462 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 SLC17A7Q9P2U7 560 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 CHKBQ9Y259 395 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 TRIP11Q15643 1979 aa16.73■□□□□ 0.27
UBE3D-201ENST00000237186 A0A0A0MRY4 1105 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 FAM159BA6NKW6 160 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 C2CD2LO14523 706 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 UNC5CO95185 931 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 RGS2P41220 211 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 MNAT1P51948 309 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 FSCN1Q16658 493 aaKnown RBP16.72■□□□□ 0.27
UBE3D-201ENST00000237186 SYCP2LQ5T4T6 812 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 WSCD1Q658N2 575 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 TWF2Q6IBS0 349 aaKnown RBP16.72■□□□□ 0.27
UBE3D-201ENST00000237186 UNC5AQ6ZN44 842 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 CLEC20AQ6ZU45 233 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 TBC1D1Q86TI0 1168 aaPredicted RBP16.72■□□□□ 0.27
UBE3D-201ENST00000237186 FAM131BQ86XD5 332 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 GSDMBQ8TAX9 411 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 KLHL29Q96CT2 875 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 CFAP36Q96G28 342 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 SPATA13Q96N96 652 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 LRRC37BQ96QE4 947 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 MANSC1Q9H8J5 431 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 ARHGEF4Q9NR80 690 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 MKS1Q9NXB0 559 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.72■□□□□ 0.27
UBE3D-201ENST00000237186 TRPM7Q96QT4 1865 aa16.72■□□□□ 0.27
UBE3D-201ENST00000237186 GOLGA8RI6L899 631 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 KPNA6O60684 536 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 ZNF189O75820 626 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 FBXO21O94952 628 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 TGDSO95455 350 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 GLUD2P49448 558 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 AIF1P55008 147 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 SARNPP82979 210 aaKnown RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 DCAF6Q58WW2 860 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 ANKRD20A2Q5SQ80 823 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 ANKRD20A1Q5TYW2 823 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 ANKRD20A3Q5VUR7 823 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 SAPCD2Q86UD0 394 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 PYROXD2Q8N2H3 581 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 TMEM86AQ8N2M4 240 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 PPM1NQ8N819 430 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 MTBPQ96DY7 904 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 KLF6Q99612 283 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 TSPYL2Q9H2G4 693 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 EIF2B3Q9NR50 452 aaKnown RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 CHST12Q9NRB3 414 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 TXLNGQ9NUQ3 528 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 PCDHA11Q9Y5I1 949 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 C9IYK1 514 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 H3BRJ5 948 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 KLF11O14901 512 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 BEST1O76090 585 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 PYGBP11216 843 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 VAV1P15498 845 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 CCNFP41002 786 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 GJA9P57773 515 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 PRKD1Q15139 912 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 TAF1CQ15572 869 aaPredicted RBP16.71■□□□□ 0.27
UBE3D-201ENST00000237186 RGMBQ6NW40 437 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 RNF139Q8WU17 664 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 FAM149B1Q96BN6 582 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 MYLK2Q9H1R3 596 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 SMYD2Q9NRG4 433 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 MOCS1Q9NZB8 636 aa16.71■□□□□ 0.27
UBE3D-201ENST00000237186 TRIM49D1C9J1S8 452 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 CLDN5O00501 218 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 OPHN1O60890 802 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 ALDH1A2O94788 518 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 CYP2B6P20813 491 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 LHX1P48742 406 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 KCNJ2P63252 427 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 MRPS6P82932 125 aaKnown RBP16.7■□□□□ 0.26
UBE3D-201ENST00000237186 PAFAH1B3Q15102 231 aaKnown RBP16.7■□□□□ 0.26
UBE3D-201ENST00000237186 FAM182AQ5T1J6 154 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 KIAA0319Q5VV43 1072 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 FYB2Q5VWT5 728 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 STEAP4Q687X5 459 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 CTAGE3PQ8IX95 158 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 LRRN4Q8WUT4 740 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 WNT8BQ93098 351 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 NTAN1Q96AB6 310 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 SENP8Q96LD8 212 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 ZFP42Q96MM3 310 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 APBA2Q99767 749 aa16.7■□□□□ 0.26
UBE3D-201ENST00000237186 PDCD11Q14690 1871 aaKnown RBP16.7■□□□□ 0.26
UBE3D-201ENST00000237186 RFPL1O75677 317 aa16.69■□□□□ 0.26
UBE3D-201ENST00000237186 KRT38O76015 456 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms