RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SNX17Q15036 470 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 LPCAT4Q643R3 524 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 FAM151AQ8WW52 585 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 S100A14Q9HCY8 104 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 ZNF180Q9UJW8 692 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 LSM1O15116 133 aaKnown RBP14.17□□□□□ -0.14
HCFC2-201ENST00000229330 MAGEB2O15479 319 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 GP5P40197 560 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 ZNF235Q14590 738 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 TAF5Q15542 800 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 GSTCDQ8NEC7 633 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 ZSWIM2Q8NEG5 633 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 RDM1Q8NG50 284 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 VCPIP1Q96JH7 1222 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 CHST12Q9NRB3 414 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 AFF4Q9UHB7 1163 aaKnown RBP14.17□□□□□ -0.14
HCFC2-201ENST00000229330 ABT1Q9ULW3 272 aaKnown RBP14.17□□□□□ -0.14
HCFC2-201ENST00000229330 PNMA8CA0A1B0GUJ8 204 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 NDUFS3O75489 264 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 MARCKSL1P49006 195 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 OSBPL11Q9BXB4 747 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 DIABLOQ9NR28 239 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 CIDEBQ9UHD4 219 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 TRMUO75648 421 aaKnown RBP14.17□□□□□ -0.14
HCFC2-201ENST00000229330 GH1P01241 217 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 EIF2S1P05198 315 aaKnown RBP14.17□□□□□ -0.14
HCFC2-201ENST00000229330 TPBGLP0DKB5 382 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 GOLGA7BQ2TAP0 167 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 FAM98BQ52LJ0 330 aaKnown RBP14.17□□□□□ -0.14
HCFC2-201ENST00000229330 GRTP1Q5TC63 336 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 ITFG2Q969R8 447 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 POLR1BQ9H9Y6 1135 aa14.17□□□□□ -0.14
HCFC2-201ENST00000229330 EME2A4GXA9 379 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 MAP3K13O43283 966 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CCDC166P0CW27 439 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CASP7P55210 303 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 TRAF3Q13114 568 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 KCTD19Q17RG1 926 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 ZNF560Q96MR9 790 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 TMEM109Q9BVC6 243 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 TRIM62Q9BVG3 475 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 UBE2OQ9C0C9 1292 aaKnown RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 POLD3Q15054 466 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CYP51A1Q16850 503 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 KBTBD2Q8IY47 623 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 SEPT1Q8WYJ6 367 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 VPS33AQ96AX1 596 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 NSMCE2Q96MF7 247 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 COMMD8Q9NX08 183 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 DKK3Q9UBP4 350 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 NWD1Q149M9 1564 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 PCSK7Q16549 785 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 NDUFA5Q16718 116 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 SV2AQ7L0J3 742 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 LPAR1Q92633 364 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 PWWP2AQ96N64 755 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 DGCR6LQ9BY27 220 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CLK4Q9HAZ1 481 aaKnown RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CNOT3O75175 753 aaKnown RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 IL18RAPO95256 599 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 ACADSBP45954 432 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 PLIN5Q00G26 463 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CYP24A1Q07973 514 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 KHDC1Q4VXA5 237 aaKnown RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 IRF2BP2Q7Z5L9 587 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 BBS7Q8IWZ6 715 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 TARS2Q9BW92 718 aaKnown RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 KCNH7Q9NS40 1196 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 POLLQ9UGP5 575 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CDV3Q9UKY7 258 aaKnown RBP14.16□□□□□ -0.14
HCFC2-201ENST00000229330 GJB6O95452 261 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 TMEM132DQ14C87 1099 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 ARHGEF6Q15052 776 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CNPY1Q3B7I2 92 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CBWD6Q4V339 395 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CBWD3Q5JTY5 395 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CBWD5Q5RIA9 395 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 GPR107Q5VW38 600 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 THEM5Q8N1Q8 247 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 GLIS3Q8NEA6 775 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 SPATA17Q96L03 361 aa14.16□□□□□ -0.14
HCFC2-201ENST00000229330 CYTH3O43739 400 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 FAM20BO75063 409 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 ZMPSTE24O75844 475 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 SOAT2O75908 522 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 RBP1P09455 135 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 C6orf222P0C671 652 aaPredicted RBP14.15□□□□□ -0.14
HCFC2-201ENST00000229330 CCNA2P20248 432 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 ARPP19P56211 112 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 IL17AQ16552 155 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 ATP6AP1LQ52LC2 224 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 C16orf46Q6P387 395 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 STK32CQ86UX6 486 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 TPRKBQ9Y3C4 175 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 PTGES3LE9PB15 166 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 DDHD2O94830 711 aa14.15□□□□□ -0.14
HCFC2-201ENST00000229330 CSPG5O95196 566 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms