RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ETNK2Q9NVF9 386 aa14.14□□□□□ -0.15
NFKB1-201ENST00000226574 TAS2R1Q9NYW7 299 aa14.14□□□□□ -0.15
NFKB1-201ENST00000226574 UBIAD1Q9Y5Z9 338 aa14.14□□□□□ -0.15
NFKB1-201ENST00000226574 ACTL7BQ9Y614 415 aa14.14□□□□□ -0.15
NFKB1-201ENST00000226574 ROBO3Q96MS0 1386 aa14.14□□□□□ -0.15
NFKB1-201ENST00000226574 ATP6AP2A0A1C7CYW4 349 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 FKBP6O75344 327 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 ATP6AP2O75787 350 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 VAPBO95292 243 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 ECHS1P30084 290 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 MAP3K7CLP57077 242 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 MGAT5Q09328 741 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 RIPK1Q13546 671 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 TAS2R42Q7RTR8 314 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 ULK2Q8IYT8 1036 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 OR52K1Q8NGK4 314 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 HTR3CQ8WXA8 447 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 TUBGCP3Q96CW5 907 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 CADM1Q9BY67 442 aaKnown RBP14.13□□□□□ -0.15
NFKB1-201ENST00000226574 LRMDAQ9H2I8 198 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 WDR55Q9H6Y2 383 aaPredicted RBP14.13□□□□□ -0.15
NFKB1-201ENST00000226574 SLC5A4Q9NY91 659 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 SPDYE5A6NIY4 337 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 SIGLEC16A6NMB1 481 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 SERPINE1P05121 402 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 CSE1LP55060 971 aaKnown RBP14.13□□□□□ -0.15
NFKB1-201ENST00000226574 ZBTB49Q6ZSB9 765 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 BBS12Q6ZW61 710 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 KYQ8NBH2 561 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 E5RI56 91 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 PFDN6O15212 129 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 LRCH4O75427 683 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 PIGNO95427 931 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 CCDC130P13994 396 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 HDAC4P56524 1084 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 DAB2P98082 770 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 CAPSQ13938 189 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 PDK2Q15119 407 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 OTUD3Q5T2D3 398 aaPredicted RBP14.13□□□□□ -0.15
NFKB1-201ENST00000226574 FRA10AC1Q70Z53 315 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 SNRNP25Q9BV90 132 aaKnown RBP14.13□□□□□ -0.15
NFKB1-201ENST00000226574 WDCPQ9H6R7 721 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 LRRC40Q9H9A6 602 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 APOBEC3GQ9HC16 384 aaKnown RBP14.13□□□□□ -0.15
NFKB1-201ENST00000226574 ZMYM2Q9UBW7 1377 aa14.13□□□□□ -0.15
NFKB1-201ENST00000226574 C19orf81C9J6K1 198 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 TPBGLP0DKB5 382 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 CYP2C9P11712 490 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ALADP13716 330 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 NFKBIAP25963 317 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 PSMB4P28070 264 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ADIGQ0VDE8 80 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 PPM1JQ5JR12 505 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 SH3PXD2AQ5TCZ1 1133 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 TATDN1Q6P1N9 297 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 DEFB106AQ8N104 65 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 PPHLN1Q8NEY8 458 aaKnown RBP14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ULK4Q96C45 1275 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ZNF560Q96MR9 790 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 PHACTR1Q9C0D0 580 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 PORCNQ9H237 461 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 CAB39LQ9H9S4 337 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 VANGL2Q9ULK5 521 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 CORO1CQ9ULV4 474 aaPredicted RBP14.12□□□□□ -0.15
NFKB1-201ENST00000226574 PPME1Q9Y570 386 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 AKAP12Q02952 1782 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 UBR1Q8IWV7 1749 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 TRIM13O60858 407 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ASMTLO95671 621 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 GRIK1P39086 918 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 R3HDM1Q15032 1099 aaKnown RBP14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ACSBG2Q5FVE4 666 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 RINLQ6ZS11 566 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 HPS6Q86YV9 775 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 TFAP2BQ92481 460 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 VPS50Q96JG6 964 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 SLC12A4Q9UP95 1085 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ACOT9Q9Y305 439 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 SNX5Q9Y5X3 404 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 TCRBV7S3A2A0A539 114 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 BUD23O43709 281 aaKnown RBP14.12□□□□□ -0.15
NFKB1-201ENST00000226574 UNC5AQ6ZN44 842 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 OR6J1Q8NGC5 347 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 OR6Y1Q8NGX8 325 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 SLC2A14Q8TDB8 520 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 NDRG1Q92597 394 aaKnown RBP14.12□□□□□ -0.15
NFKB1-201ENST00000226574 SEPHS2Q99611 448 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 TMEM79Q9BSE2 394 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ZNF212Q9UDV6 495 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 DRG1Q9Y295 367 aaKnown RBP14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ABCC6O95255 1503 aa14.12□□□□□ -0.15
NFKB1-201ENST00000226574 ITGAVP06756 1048 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 GRK2P25098 689 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 GBE1Q04446 702 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 OCA2Q04671 838 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 STILQ15468 1287 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.11□□□□□ -0.15
NFKB1-201ENST00000226574 BLOC1S5Q8TDH9 187 aa14.11□□□□□ -0.15
NFKB1-201ENST00000226574 FRMD8Q9BZ67 464 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms