RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 PAGE2Q7Z2X7 111 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 METTL23Q86XA0 190 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 LIMD1Q9UGP4 676 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 H0Y858 1186 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 TNPO2O14787 897 aaKnown RBP11.35□□□□□ -0.59
USP31-201ENST00000219689 SCNN1DP51172 638 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 FRMD7Q6ZUT3 714 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 CCDC115Q96NT0 180 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 PACSIN3Q9UKS6 424 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 NPR3P17342 541 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 CCDC157Q569K6 752 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 SETD9Q8NE22 299 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.35□□□□□ -0.59
USP31-201ENST00000219689 LBPP18428 481 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 ZBTB38Q8NAP3 1195 aaPredicted RBP11.35□□□□□ -0.59
USP31-201ENST00000219689 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 CNOT7Q9UIV1 285 aaKnown RBP11.35□□□□□ -0.59
USP31-201ENST00000219689 UBXN8O00124 270 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 DNM1LO00429 736 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 MYBP10242 640 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 FAM9CQ8IZT9 166 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 GRIA3P42263 894 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 SPIRE1Q08AE8 756 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 N4BP2L1Q5TBK1 243 aaPredicted RBP11.35□□□□□ -0.59
USP31-201ENST00000219689 ZCCHC23Q6ZST2 131 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A9O60656 530 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A6P19224 532 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A1P22309 533 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A4P22310 534 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A3P35503 534 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A5P35504 534 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 CAPZA2P47755 286 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 MSLNQ13421 630 aaPredicted RBP11.35□□□□□ -0.59
USP31-201ENST00000219689 ZNF544Q6NX49 715 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 ENOSF1Q7L5Y1 443 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 ENGASEQ8NFI3 743 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 APOPT1Q96IL0 206 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A7Q9HAW7 530 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A10Q9HAW8 530 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 UGT1A8Q9HAW9 530 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 GPRC5DQ9NZD1 345 aa11.35□□□□□ -0.59
USP31-201ENST00000219689 CHI3L1P36222 383 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 FAPQ12884 760 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 EML3Q32P44 896 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 FAM129BQ96TA1 746 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 RIC8BQ9NVN3 520 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SLC24A2Q9UI40 661 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SLC8A2Q9UPR5 921 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 MYMKA6NI61 221 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 TSPAN19P0C672 248 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 MMP14P50281 582 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 POU4F1Q01851 419 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 BNIP1Q12981 228 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 MTX3Q5HYI7 312 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SYDE2Q5VT97 1194 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 VN1R5Q7Z5H4 357 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 DLG3Q92796 817 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ZNF669Q96BR6 464 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 KCND1Q9NSA2 647 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ABCG2Q9UNQ0 655 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 INTS1Q8N201 2190 aaKnown RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 DOCK7Q96N67 2140 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 CST8O60676 142 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 GPC3P51654 580 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ITGA1P56199 1179 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 GTF2IP78347 998 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 TBC1D21Q8IYX1 336 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 PIH1D3Q9NQM4 214 aaKnown RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP31-201ENST00000219689 CROTQ9UKG9 612 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 GTF2A1LQ9UNN4 478 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 NCF1BA6NI72 391 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 NCF1CA8MVU1 366 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 NCF1P14598 390 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 GDI2P50395 445 aaKnown RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 EFHC2Q5JST6 749 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 PTAR1Q7Z6K3 402 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 STRA8Q7Z7C7 330 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 WDR41Q9HAD4 459 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 RNF112Q9ULX5 631 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 USP17L5A8MUK1 530 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 SHOX2O60902 331 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 TMEM253P0C7T8 217 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 MLNP12872 115 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 MYO1HQ8N1T3 1032 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ATG2BQ96BY7 2078 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 DENND3A2RUS2 1198 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 MT-CO1P00395 513 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 CNPP09543 421 aaKnown RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 MSL3P1P0C860 447 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ZC2HC1CQ53FD0 456 aaPredicted RBP11.34□□□□□ -0.59
USP31-201ENST00000219689 ZNF613Q6PF04 617 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 STOX1Q6ZVD7 989 aa11.34□□□□□ -0.59
USP31-201ENST00000219689 ASAP3Q8TDY4 903 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms