RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 NR2C2P49116 596 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 OCRLQ01968 901 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 DRICH1Q6PGQ1 229 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 NDRG1Q92597 394 aaKnown RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC24A3Q9HC58 644 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 AIM2O14862 343 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 HMBSP08397 361 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ALADP13716 330 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 KLRC2P26717 231 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ATXN3P54252 364 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 MGAT5Q09328 741 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ANKRD20A2Q5SQ80 823 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ANKRD20A1Q5TYW2 823 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 UNC93AQ86WB7 457 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 SLC25A41Q8N5S1 370 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ANKRD52Q8NB46 1076 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 TTC8Q8TAM2 541 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 L3MBTL3Q96JM7 780 aaPredicted RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 GAD1Q99259 594 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 SPON2Q9BUD6 331 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ULBP1Q9BZM6 244 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 PRDM12Q9H4Q4 367 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 SP110Q9HB58 689 aa12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
TM9SF4-201ENST00000217315 A8MUI8 341 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 GPD2P43304 727 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 POLE2P56282 527 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 BST1Q10588 318 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ITGA9Q13797 1035 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 MFSD10Q14728 455 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 HSP90AA5PQ58FG0 334 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 NAPEPLDQ6IQ20 393 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 EPS15L1Q9UBC2 864 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 TCRBV7S3A2A0A539 114 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 MTSS1O43312 755 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ATG7O95352 703 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ERVK-10P10266 1014 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 PSMB4P28070 264 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 GRM5P41594 1212 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 KLF1Q13351 362 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 C6orf89Q6UWU4 347 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ILDR2Q71H61 639 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ANKS1BQ7Z6G8 1248 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 CCNJLQ8IV13 435 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 STKLD1Q8NE28 680 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 OXNAD1Q96HP4 312 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ZNF670Q9BS34 389 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 DCLRE1BQ9H816 532 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 KLHL2O95198 593 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 C22orf31O95567 290 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 RALBP11234 206 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 CDC25CP30307 473 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 AVPR1AP37288 418 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 TARBP2Q15633 366 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 RAB44Q7Z6P3 723 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 PDCD6IPQ8WUM4 868 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 LRRC39Q96DD0 335 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 LRGUKQ96M69 825 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 UNKQ9C0B0 810 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 IARS2Q9NSE4 1012 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 DCDC2Q9UHG0 476 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 VANGL2Q9ULK5 521 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 PRG3Q9Y2Y8 225 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 LTBP4Q8N2S1 1624 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 C2CD4BA6NLJ0 364 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 TRDMT1O14717 391 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 TSPAN1O60635 241 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 GMNNO75496 209 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 POMCP01189 267 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 USP17L7P0C7H9 530 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 KLC1Q07866 573 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 BNIP1Q12981 228 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 MPP2Q14168 576 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 NOL9Q5SY16 702 aaKnown RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 PPTC7Q8NI37 304 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 LPIN3Q9BQK8 851 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 PDLIM7Q9NR12 457 aa12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 ABI2Q9NYB9 513 aaPredicted RBP12.72□□□□□ -0.37
TM9SF4-201ENST00000217315 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 LAMB2P55268 1798 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 A0A0A0MRY4 1105 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 PRPF4O43172 522 aaKnown RBP eCLIP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 ENTPD5O75356 428 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 DGKIO75912 1065 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 ENO3P13929 434 aaPredicted RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 CPA3P15088 417 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 THPOP40225 353 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 ATXN1P54253 815 aaKnown RBP12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 CDK16Q00536 496 aa12.71□□□□□ -0.37
TM9SF4-201ENST00000217315 MPP3Q13368 585 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms