RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 OR52L1Q8NGH7 329 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 MED8Q96G25 268 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 BRD9Q9H8M2 597 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CHMP1AQ9HD42 196 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 VPS28Q9UK41 221 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 UBQLN1Q9UMX0 589 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 SNX13Q9Y5W8 968 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 BCLAF3A2AJT9 711 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 AGRPO00253 132 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 OR7A10O76100 309 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ENDOD1O94919 500 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 LRPAP1P30533 357 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 OMPP47874 163 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 EIF4A2Q14240 407 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 FOXR2Q6PJQ5 311 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ATP10AO60312 1499 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ABCC1P33527 1531 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ZMYM2Q9UBW7 1377 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 DLX3O60479 287 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CYP2C8P10632 490 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 EPHX2P34913 555 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 SPRP35270 261 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 METTL3Q86U44 580 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TMC8Q8IU68 726 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 BEND7Q8N7W2 519 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 DENND1AQ8TEH3 1009 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 EEF1AKMT1Q8WVE0 214 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 CCDC126Q96EE4 140 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 JPH1Q9HDC5 661 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 RPH3AQ9Y2J0 694 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 TTC34A8MYJ7 566 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 KPNA5O15131 536 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 S100A9P06702 114 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 MYL2P10916 166 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 ATP5A1P25705 553 aaKnown RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 LTKP29376 864 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PLTPP55058 493 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 GPIHBP1Q8IV16 184 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 LRRC71Q8N4P6 559 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 GAB3Q8WWW8 586 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 JSRP1Q96MG2 331 aaPredicted RBP3.54□□□□□ -1.84
NEB-201ENST00000172853 C5orf34Q96MH7 638 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 EPS8L2Q9H6S3 715 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 PRDM8Q9NQV8 689 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 INVSQ9Y283 1065 aa3.54□□□□□ -1.84
NEB-201ENST00000172853 FAM135BQ49AJ0 1406 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 GAS2O43903 313 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 PDE9AO76083 593 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 OR6B1O95007 311 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 KRT75O95678 551 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 BMP4P12644 408 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 IRF2P14316 349 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MAD2L1Q13257 205 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 IL18R1Q13478 541 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 DDX39BQ13838 428 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 NFE2Q16621 373 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 CWF19L1Q69YN2 538 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 SNX32Q86XE0 403 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 LPAR1Q92633 364 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 GPER1Q99527 375 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SMAD5Q99717 465 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 CATSPERZQ9NTU4 200 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 HPS5Q9UPZ3 1129 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PCDHA11Q9Y5I1 949 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RBAK-RBAKDNI3L0D1 243 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RPS6KA4O75676 772 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PIK3CGP48736 1102 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PPIDQ08752 370 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 GJD4Q96KN9 370 aaPredicted RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 AP1S3Q96PC3 154 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 CHID1Q9BWS9 393 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PHF11Q9UIL8 331 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 RNF112Q9ULX5 631 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 NR2E1Q9Y466 385 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 NPATQ14207 1427 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TRIM24O15164 1050 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 CFIP05156 583 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ATP6V1B1P15313 513 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ZNF3P17036 446 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PPM1AP35813 382 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 AVPR1BP47901 424 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PER3P56645 1201 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PPP1R36Q96LQ0 422 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SMYD3Q9H7B4 428 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MTO1Q9Y2Z2 717 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 A0A0X1KG70 313 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 DCLK1O15075 740 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ATG13O75143 517 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 F9P00740 461 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ZNF484Q5JVG2 852 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 MTDHQ86UE4 582 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 TMEM145Q8NBT3 493 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PHC3Q8NDX5 983 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 OLFM3Q96PB7 478 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 TEX13BQ9BXU2 312 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 PCSK1NQ9UHG2 260 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 SSH2Q76I76 1423 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 CD3EAPO15446 510 aaKnown RBP3.53□□□□□ -1.84
NEB-201ENST00000172853 SGTAO43765 313 aa3.53□□□□□ -1.84
NEB-201ENST00000172853 ITPKBP27987 946 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms