RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 EID3Q8N140 333 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 INPP5DQ92835 1189 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 COL3A1P02461 1466 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 UBDO15205 165 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TRAF7Q6Q0C0 670 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 IL22Q9GZX6 179 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ELOVL6Q9H5J4 265 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ABI2Q9NYB9 513 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 RPL26L1Q9UNX3 145 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 AKAP12Q02952 1782 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 CLUHO75153 1309 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ZBTB39O15060 712 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TRIM24O15164 1050 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 MED24O75448 989 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 SARSP49591 514 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 CCDC103Q8IW40 242 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 KIF2BQ8N4N8 673 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 PPP1R10Q96QC0 940 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 RAD18Q9NS91 495 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TNPO3Q9Y5L0 923 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 PDZK1P1A8MUH7 402 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 SEC24CP53992 1094 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 NTRK3Q16288 839 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 MAGEC3Q8TD91 643 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 C9orf16Q9BUW7 83 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ELOVL4Q9GZR5 314 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 COPS7BQ9H9Q2 264 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 KCNK4Q9NYG8 393 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 AKAP3O75969 853 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 PABPC1P11940 636 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 CACNB2Q08289 660 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 CEP78Q5JTW2 689 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 SLC47A2Q86VL8 602 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TMEM86AQ8N2M4 240 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 UBA3Q8TBC4 463 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 FAM208AQ9UK61 1670 aaKnown RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 FAM220BPB1ANY3 271 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 RAD51BO15315 384 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 APOC2P02655 101 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TMEM119Q4V9L6 283 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 LRRC38Q5VT99 294 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 DPP10Q8N608 796 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 FAM124BQ9H5Z6 455 aaPredicted RBP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 TAS2R13Q9NYV9 303 aa12.88□□□□□ -0.35
LMCD1-201ENST00000157600 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
LMCD1-201ENST00000157600 ALADP13716 330 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 RRM1P23921 792 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 SERPINB5P36952 375 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CD151P48509 253 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 FRG1Q14331 258 aaKnown RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 MEA1Q16626 185 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 DDR2Q16832 855 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 FBXO25Q8TCJ0 367 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 SEMA6BQ9H3T3 888 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 PCDHGC5Q9Y5F6 944 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CYP2A7P20853 494 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CYP2F1P24903 491 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 PPIL2Q13356 520 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 TSNQ15631 228 aaKnown RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 TRAPPC9Q96Q05 1148 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 PANX3Q96QZ0 392 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 FUCA2Q9BTY2 467 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CORO2BQ9UQ03 480 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CHADO15335 359 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 RIPK2O43353 540 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 MSH3P20585 1137 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 ULK2Q8IYT8 1036 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 ATG4CQ96DT6 458 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 BBS2Q9BXC9 721 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 C1QTNF7Q9BXJ2 289 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 C6orf203Q9P0P8 240 aaPredicted RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 SLIT3O75094 1523 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 HERVK_113P62684 666 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CROCCP3Q8IVE0 287 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 OPLAHO14841 1288 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 EPHB3P54753 998 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CBWD2Q8IUF1 395 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 LRRC49Q8IUZ0 686 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 SLC5A5Q92911 643 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 SPATA17Q96L03 361 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 NRDE2Q9H7Z3 1164 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 EXOSC4Q9NPD3 245 aaKnown RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 MIEF1Q9NQG6 463 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 UXTQ9UBK9 157 aaPredicted RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 CHD2O14647 1828 aaKnown RBP12.87□□□□□ -0.35
LMCD1-201ENST00000157600 TRIM66O15016 1216 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 SGPL1O95470 568 aa12.87□□□□□ -0.35
LMCD1-201ENST00000157600 ERBB2P04626 1255 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms