RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SOX11P35716 441 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 VGLL4Q14135 290 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 RRP1BQ14684 758 aaKnown RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 EFTUD2Q15029 972 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■■■■ 47.7
TSPAN9-201ENST00000011898 RAB44Q7Z6P3 723 aaPredicted RBP12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 FAM13CQ8NE31 585 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 VCPIP1Q96JH7 1222 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 SLC24A2Q9UI40 661 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 NCANO14594 1321 aa12.5□□□□□ -0.41
TSPAN9-201ENST00000011898 GSTA4O15217 222 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 IL18RAPO95256 599 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CHN2P52757 468 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 FMO1Q01740 532 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 TRAF2Q12933 501 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CHI3L2Q15782 390 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CHST13Q8NET6 341 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 PBXIP1Q96AQ6 731 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CENPTQ96BT3 561 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 TNIP3Q96KP6 325 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 DEPDC7Q96QD5 511 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 GTSE1Q9NYZ3 720 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 LYNP07948 512 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 SERPINB9P50453 376 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 FASTKD5Q7L8L6 764 aaKnown RBP12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 IFNEQ86WN2 208 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 TMPRSS6Q8IU80 811 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 RBM12BQ8IXT5 1001 aaKnown RBP12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 UCMAQ8WVF2 138 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 ERVK-5Q9HDB9 667 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 C16orf96A6NNT2 1141 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 KLHL41O60662 606 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 ZSCAN5DPP0CG00 497 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 NOVP48745 357 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 PDK3Q15120 406 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CNGA2Q16280 664 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 ASTE1Q2TB18 679 aaPredicted RBP12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 TTC39BQ5VTQ0 682 aaPredicted RBP12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 PALB2Q86YC2 1186 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 LRRC57Q8N9N7 239 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 EXT2Q93063 718 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 FSD1LQ9BXM9 530 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 PCDH9Q9HC56 1237 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 SHOC2Q9UQ13 582 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 AK5Q9Y6K8 562 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 MROH7Q68CQ1 1323 aa12.49□□□□□ -0.41
TSPAN9-201ENST00000011898 GRK2P25098 689 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 CLCN3P51790 818 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 PKN2Q16513 984 aaKnown RBP12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 RASGEF1CQ8N431 466 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 TMEM79Q9BSE2 394 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 NEUROG2Q9H2A3 272 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 PGAP2Q9UHJ9 254 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 GRID1Q9ULK0 1009 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 SNX13Q9Y5W8 968 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 GON4LQ3T8J9 2241 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 E2F8A0AVK6 867 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 F8VP50 259 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 MATN2O00339 956 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 PFDN6O15212 129 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 HBP1O60381 514 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ITGA2BP08514 1039 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 SKIV2LQ15477 1246 aaKnown RBP12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 KYAT1Q16773 422 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 TMEM161BQ8NDZ6 487 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ZNF570Q96NI8 536 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 TMEM120AQ9BXJ8 343 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ASB14A6NK59 587 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 FCHO1O14526 889 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 SNAPC2Q13487 334 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 PTK6Q13882 451 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 BBS5Q8N3I7 341 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 IL31RAQ8NI17 732 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 HPS1Q92902 700 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 PLEKHG4BQ96PX9 1271 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 FRMD8Q9BZ67 464 aaPredicted RBP12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 LRRC19Q9H756 370 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 MOSPD1Q9UJG1 213 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 MKL2Q9ULH7 1088 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 NR2E1Q9Y466 385 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 CXCL11O14625 94 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 MAGEB2O15479 319 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 SEMA3DO95025 777 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 NUDT2P50583 147 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 TMEM62Q0P6H9 643 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 NR1D2Q14995 579 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 NEDD8Q15843 81 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 EXOC3L1Q86VI1 746 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ZBTB8BQ8NAP8 495 aaPredicted RBP12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 ATP6V1E2Q96A05 226 aa12.48□□□□□ -0.41
TSPAN9-201ENST00000011898 RMND5BQ96G75 393 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms