RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 C1QBPQ07021 282 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SPIRE1Q08AE8 756 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MTX3Q5HYI7 312 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 NFRKBQ6P4R8 1299 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 GPALPP1Q8IXQ4 340 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 HIPK4Q8NE63 616 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 DSN1Q9H410 356 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PCDH9Q9HC56 1237 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 FRMPD4Q14CM0 1322 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ANKRD36CQ5JPF3 1778 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 KIF13BQ9NQT8 1826 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SUPT3HB4E1H0 165 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SLC22A2O15244 555 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 FGF10O15520 208 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 HTR7P34969 479 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 AIF1P55008 147 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZYXQ15942 572 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 DGKDQ16760 1214 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SPANXN3Q5MJ09 141 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PPP1R15BQ5SWA1 713 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZCCHC7Q8N3Z6 543 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 OR7A2PQ8NGA2 310 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZFP28Q8NHY6 868 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 RNF112Q9ULX5 631 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 A0A087WZ62 844 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZSCAN5CA6NGD5 496 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF23P17027 643 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 GCLCP48506 637 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 TRAF3Q13114 568 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PRKG1Q13976 671 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PLEKHF1Q96S99 279 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PARK7Q99497 189 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 THUMPD3Q9BV44 507 aaKnown RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CINPQ9BW66 212 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 WWOXQ9NZC7 414 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ATXN10Q9UBB4 475 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 USP21Q9UK80 565 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 TBC1D30Q9Y2I9 924 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 RTN3O95197 1032 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SEC24BO95487 1268 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 LYNP07948 512 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 RPA1P27694 616 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 IRAK1P51617 712 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 WDR72Q3MJ13 1102 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ARHGEF19Q8IW93 802 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ANKRD13CQ8N6S4 541 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 DLGAP2Q9P1A6 1054 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 FBXO2Q9UK22 296 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SH3BP1Q9Y3L3 701 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 TP53BP1Q12888 1972 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SCN1AP35498 2009 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MAGEC1O60732 1142 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 GCATO75600 419 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MFN2O95140 757 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 TGDSO95455 350 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 CTCFP49711 727 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ACTN3Q08043 901 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SLC29A2Q14542 456 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF618Q5T7W0 954 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 TRIM48Q8IWZ4 208 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 HPS1Q92902 700 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZNF594Q96JF6 807 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 C12orf66Q96MD2 445 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MUC3BQ9H195 1237 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 UPB1Q9UBR1 384 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 AGLP35573 1532 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 FAM92AA1XBS5 289 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 SFI1A8K8P3 1242 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 ACADVLP49748 655 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 NUDT2P50583 147 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 NR1H2P55055 460 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 MCOLN3Q8TDD5 553 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 GPN1Q9HCN4 374 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 UXTQ9UBK9 157 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-201ENST00000011700 RAPGEFL1Q9UHV5 662 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 DOLKQ9UPQ8 538 aa6.23□□□□□ -1.41
VPS13D-201ENST00000011700 RAD51BO15315 384 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 HBP1O60381 514 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 BMT2Q1RMZ1 405 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 LRRC36Q1X8D7 754 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 PYHIN1Q6K0P9 492 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ZBTB49Q6ZSB9 765 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SLC44A2Q8IWA5 706 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SNX31Q8N9S9 440 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 SENP6Q9GZR1 1112 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NUAK2Q9H093 628 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ELOVL6Q9H5J4 265 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 ITGA11Q9UKX5 1188 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 STK25O00506 426 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CLIC2O15247 247 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 GPD1P21695 349 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 STOMP27105 288 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 NAMPTP43490 491 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 CBX5P45973 191 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 GCLMP48507 274 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 RASSF6Q6ZTQ3 369 aa6.22□□□□□ -1.41
VPS13D-201ENST00000011700 TMEM26Q6ZUK4 368 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms