RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Zdhhc17Q80TN5 632 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Clec2eQ80XD9 204 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Il33Q8BVZ5 266 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Bicdl2Q8CHW5 507 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Tram1l1Q8QZR0 363 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Ttc39cQ8VE09 580 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Mat1aQ91X83 396 aaKnown RBP16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Cts3Q91ZD5 332 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Sytl2Q99N50 950 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Nol7Q9D7Z3 254 aaKnown RBP16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Fbxl12Q9EPX5 326 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Cables1Q9ESJ1 568 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Tcf20Q9EPQ8 1987 aa16.04■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Cacna1eQ61290 2272 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 EloblA6PWE0 161 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Gm9992B2RWK3 458 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Zfp408H7BX78 710 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Cd8aP01731 247 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Hoxa9P09631 271 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 TshrP47750 764 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Htr4P97288 388 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Gjb5Q02739 271 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Bcl2a1cQ0P538 128 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Gpr174Q3U507 335 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Olfr121Q5CZY0 321 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Q66JV7 365 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Lsm8Q6ZWM4 96 aaKnown RBP16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Unc93aQ710D3 458 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Pum1Q80U78 1189 aaKnown RBP16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Best2Q8BGM5 508 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Olfr342Q8VGK7 312 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Usp3Q91W36 520 aaKnown RBP16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Slc12a6Q924N4 1150 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 FastkQ9JIX9 511 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Trpc2Q9R244 1172 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Gfpt2Q9Z2Z9 682 aa16.03■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Osbpl7A2A716 963 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Syce3B5KM66 88 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Gm2956E9PVJ0 216 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 LipiF6YQT7 476 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Sclt1G5E861 688 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Gm8108K7N734 216 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Agap2Q3UHD9 1186 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Rap1gap2Q5SVL6 712 aaKnown RBP16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Stard3Q61542 446 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Dhx40Q6PE54 779 aaKnown RBP16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Ccdc57Q6PHN1 1016 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Tlr13Q6R5N8 991 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Ankrd52Q8BTI7 1076 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Cbwd1Q8VEH6 393 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Prc1Q99K43 603 aaKnown RBP16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 PigxQ99LV7 254 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Mageb16Q9CWV4 363 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Mcur1Q9CXD6 340 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Slco6d1Q9D5W6 683 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 SelenooQ9DBC0 667 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Dcaf6Q9DC22 876 aa16.02■□□□□ 0.16
Hmgb1-208ENSMUST00000139443 Cacna1gQ5SUF7 2381 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 DgkdE9PUQ8 1220 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Fbrsl1E9Q9T0 1031 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Grip2G3XA20 1042 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Adcy1O88444 1118 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Becn1O88597 448 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Adh5P28474 374 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Cnr2P47936 347 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Mxi1P50540 228 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Cry1P97784 606 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Nxpe4Q52KP5 543 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Trappc6aQ78XR0 159 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Olfr213Q7TS32 327 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Wdtc1Q80ZK9 677 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gm5622Q810Q0 167 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Heatr3Q8BQM4 679 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Defb22Q8BVC1 179 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Lrrc45Q8CIM1 670 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Commd10Q8JZY2 202 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 BbxQ8VBW5 907 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Pcdha3Q91Y16 942 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Hddc3Q9D114 179 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Cul2Q9D4H8 745 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 LrgukQ9D5S7 820 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Olfr711Q9EPG2 314 aa16.01■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Scn8aQ9WTU3 1978 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Plxnd1Q3UH93 1925 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Kctd18E0CZ26 429 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gm597E9Q8J5 896 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Nr1i3O35627 358 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Usp2O88623 613 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Sp1O89090 784 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 FynP39688 537 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Cdc25cP48967 447 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gdi1P50396 447 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Ephb2P54763 986 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 AdkP55264 361 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Neurog1P70660 244 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Ebf1Q07802 591 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Klra9Q2TJJ8 266 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Tars2Q3UQ84 723 aaKnown RBP16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 BC051142Q3V0M8 400 aa16■□□□□ 0.15
Hmgb1-208ENSMUST00000139443 Gpr156Q6PCP7 798 aa16■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms