RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 RragcQ99K70 398 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Nfu1Q9QZ23 255 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Tnfrsf11bO08712 401 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Nedd9O35177 833 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Tbxas1P36423 533 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Znf112Q0VAW7 879 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Cyp3a16Q64481 504 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Rassf10Q8BL43 508 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ttc24Q8BYG0 334 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Cabcoco1Q8CDT7 208 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Olfr615Q8VGY4 313 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 4930519G04RikQ9CPT7 205 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Gemin2Q9CQQ4 269 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Phf2Q9WTU0 1096 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Chd5A2A8L1 1946 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ccdc194A0A140LIT1 234 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Grik3B1AS29 919 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Gm5930D3Z257 264 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ces1bD3Z5G7 567 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Trim30bE9PVL6 203 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Gdf6P43028 454 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Slc16a1P53986 493 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Slc8a1P70414 970 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Cspg5Q71M36 566 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 CtbsQ8R242 366 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Cyp2c55Q9D816 490 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Fbxo17Q9QZM8 286 aa13.79□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Nup188Q6ZQH8 1759 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 C4bP01029 1738 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Col2a1P28481 1487 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Olfr271-ps1A0A1L1SQH2 283 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Fam171a2A2A699 822 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Slc4a11A2AJN7 862 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Apba1B2RUJ5 842 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Fbxl18E9PYR1 771 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 C130060K24RikG3UWA8 416 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ercc2O08811 760 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Pex5O09012 639 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Btg4O70552 250 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Tarsl2Q8BLY2 790 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Daam1Q8BPM0 1077 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Pip4k2cQ91XU3 421 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ccdc103Q9D9P2 237 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Sgf29Q9DA08 293 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Smad9Q9JIW5 430 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Rps6kb2Q9Z1M4 485 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Gm21293E9Q4G9 266 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 KitP05532 979 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 CpQ61147 1061 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Arhgap29Q8CGF1 1266 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Acad9Q8JZN5 625 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 DarsQ922B2 501 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Pde2aQ922S4 916 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Mrps2Q924T2 291 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Nme5Q99MH5 211 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Nudt8Q9CR24 210 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 ParvbQ9ES46 365 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Patl2A2ARM1 529 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Fam171a1A2ATK9 892 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Rad51ap2G3UW63 976 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Tnfaip1O70479 316 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Dennd1bQ3U1T9 766 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Atp11bQ6DFW5 1175 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ccdc117Q6PB51 277 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Them6Q80ZW2 207 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Orai2Q8BH10 250 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Fam114a2Q8VE88 497 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Senp2Q91ZX6 588 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ndufa10Q99LC3 355 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 DpysQ9EQF5 519 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Kat2bQ9JHD1 813 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 PygmQ9WUB3 842 aaKnown RBP13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Arid3bQ9Z1N7 568 aa13.78□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Prl3b1P09586 222 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ptpn1P35821 432 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Orc2Q60862 576 aaKnown RBP13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Chi3l1Q61362 389 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Msi1Q61474 362 aaKnown RBP13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Exoc3l4Q6DIA2 721 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Ubap2lQ80X50 1107 aaKnown RBP13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Arfip2Q8K221 341 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Acbd6Q9D061 282 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Cep83Q9D5R3 692 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 IkbkeQ9R0T8 717 aa13.77□□□□□ -0.2
Clcn3-204ENSMUST00000110301 Zfp985A2A7A5 519 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Casq2O09161 415 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Pias1O88907 651 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 WapP01173 134 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Itga11P61622 1188 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Actr5Q80US4 605 aaKnown RBP13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Abraxas1Q8BPZ8 407 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Olfr348Q8VGK3 313 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Pcdhb19Q91Y01 801 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 NamptQ99KQ4 491 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Sytl1Q99N80 567 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Zfp623Q9CY99 499 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Myo7aP97479 2215 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Gm12394A2AKP6 982 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Aldoart1A6ZI46 419 aa13.77□□□□□ -0.21
Clcn3-204ENSMUST00000110301 Gm2237E9Q501 211 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms