RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Skint6A7XUZ6 1240 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm5814J3QP80 125 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr611K7N609 323 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr612L7N462 323 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Klf6O08584 283 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ppm1aP49443 382 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 TdgP56581 421 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 NcstnP57716 708 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rbp1Q00915 135 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PrlrQ08501 608 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rbm44Q3V089 1013 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rbbp7Q60973 425 aaKnown RBP10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kcnt1Q6ZPR4 1224 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Chsy1Q6ZQ11 800 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mfsd5Q921Y4 450 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mrfap1Q9CQL7 125 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rnf135Q9CWS1 417 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 GOLGA7BQ9D428 167 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PorcnQ9JJJ7 461 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ap4s1Q9WVL1 144 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sned1Q70E20 1403 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zbed6D2EAC2 980 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 A530032D15RikE9Q422 215 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm17615E9Q9P2 165 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Snx3O70492 162 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 GemP55041 295 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ythdf1P59326 559 aaKnown RBP10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Galnt3P70419 633 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Etv6P97360 485 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Abi3bpQ59IW6 1179 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Clhc1Q5M6W3 596 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Znf507Q6ZPY5 941 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Arhgap26Q6ZQ82 814 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr670Q7TRP3 312 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Dctn2Q99KJ8 402 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nmd3Q99L48 503 aaKnown RBP10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Q9D937 123 aaKnown RBP10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Actl7aQ9QY84 440 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Psma4Q9R1P0 261 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 EvplQ9D952 2035 aa10.2□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr726E9Q8X3 321 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pik3r2O08908 722 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 H2-Eb1P04230 264 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 C2P21180 760 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Prox1P48437 737 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc12a1P55014 1095 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Yy1Q00899 414 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr725Q05A45 321 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ttc9Q3V038 219 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tmem237Q3V0J1 427 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ugt1a9Q62452 528 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gpd2Q64521 727 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 WlsQ6DID7 541 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tcaf3Q6QR59 914 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 VcpkmtQ8C436 228 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rps6kl1Q8R2S1 544 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kdm4bQ91VY5 1086 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Cyp4f14Q9EP75 524 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ltbp1Q8CG19 1712 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm10639E9Q6L7 222 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gsta2P10648 222 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sstr1P30873 391 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gnl1P36916 607 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 E330034G19RikQ3UWX6 351 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Mxd4Q60948 209 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Zc4h2Q68FG0 224 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Kank2Q8BX02 843 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 TbcelQ8C5W3 424 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Bclaf1Q8K019 919 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Plekha4Q8VC98 588 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Pcdhb11Q91UZ8 797 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Tbrg4Q91YM4 630 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rmnd5bQ91YQ7 393 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 GhdcQ99J23 532 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Sugt1Q9CX34 336 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Klrc2Q9WTJ9 238 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Prdm12A2AJ77 365 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm5160F8VPN3 147 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Vmn2r1O70410 912 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 PtprcP06800 1291 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Fgfr2P21803 821 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Krt2Q3TTY5 707 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 SpdyaQ5IBH7 310 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Olfr698Q7TRN4 311 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Nup93Q8BJ71 819 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Slc9a9Q8BZ00 644 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Prdm8Q8BZ97 687 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rftn2Q8CHX7 500 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 BsndQ8VIM4 307 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ppp1r3aQ99MR9 1089 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Klhl28Q9CR40 571 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Serbp1Q9CY58 407 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Alg13Q9D8C3 1166 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Hsd3b7Q9EQC1 369 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Atp6v0a1Q9Z1G4 839 aaKnown RBP10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Astn1Q61137 1302 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm4871D3Z0W7 314 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Gm5152L7N200 190 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Ptpn11P35235 597 aa10.19□□□□□ -0.78
Ldlr-201ENSMUST00000034713 Rpl10aP53026 217 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms