RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Gm3002E9PW72 216 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 C87414E9PWI7 475 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gm6205E9PZS2 359 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 FancfE9Q5Z5 343 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ercc2O08811 760 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Hoxb8P09632 243 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Krt8P11679 490 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Thumpd3P97770 505 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Grb7Q03160 535 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cd163Q2VLH6 1121 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ticam2Q8BJQ4 232 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gm6367Q8C6L9 287 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 P3h4Q8K2B0 443 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fam114a2Q8VE88 497 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Atpaf2Q91YY4 289 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Sec14l2Q99J08 403 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Bzw1Q9CQC6 419 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Syde1Q9DBZ9 737 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Mkrn2Q9ERV1 416 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Timp4Q9JHB3 224 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ccdc86Q9JJ89 426 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Neu2Q9JMH3 379 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Magel2Q9QZ04 1284 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Noc2lQ9WV70 747 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Mbd1Q9Z2E2 636 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ankrd16A2AS55 361 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 AgxtO35423 414 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Casp2P29594 452 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cav1P49817 178 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gbp4Q61107 620 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Znf185Q62394 352 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Sp140Q6NSQ5 534 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fhod1Q6P9Q4 1197 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Dclk2Q6PGN3 756 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Tdpoz3Q717B4 365 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 MogsQ80UM7 834 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 CgasQ8C6L5 507 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Zfp449Q8CB76 518 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Adgrg3Q8R0T6 542 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Olfr348Q8VGK3 313 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Vangl2Q91ZD4 521 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Slc12a6Q924N4 1150 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Akirin1Q99LF1 191 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gpihbp1Q9D1N2 228 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Kif12Q9D2Z8 642 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gkap1Q9JMB0 366 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Trpc7Q9WVC5 862 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Msl3Q9WVG9 525 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gm3336J3QMQ6 198 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 P01650 108 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 P01653 108 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Mup5P11591 180 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Zfy2P20662 777 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Rgs9bpQ148R9 237 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Alkbh5Q3TSG4 395 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PterQ60866 349 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Usp17laQ61068 526 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Pdk1Q8BFP9 434 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Kctd12bQ8C7J6 292 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gbp5Q8CFB4 590 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Znf622Q91VY9 476 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ankrd54Q91WK7 299 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Tekt2Q922G7 430 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Q922M7 232 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Sdcbp2Q99JZ0 292 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PigxQ99LV7 254 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 MtrexQ9CZU3 1040 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Spatc1lQ9D9W0 342 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Tsga13Q9DA17 273 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Upf1Q9EPU0 1124 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Prl2a1Q9JHK0 228 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Extl1Q9JKV7 669 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ripk3Q9QZL0 486 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PygmQ9WUB3 842 aaKnown RBP8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Gm5538W4VSP6 401 aa8.08□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Lama3Q61789 3330 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 PatjQ63ZW7 1834 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cyp4a29A0A087WPC3 509 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ankfn1A0A140LIW7 1083 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Lcn6A2AJB9 181 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Tubb1A2AQ07 451 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fbxl18E9PYR1 771 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ptpn1P35821 432 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 BtkP35991 659 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Il1rapl1P59823 695 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Emilin3P59900 758 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 SpertQ32MG2 446 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Pyroxd1Q3TMV7 498 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Znf583Q3V080 568 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cfhr2Q4LDF6 332 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Esyt3Q5DTI8 891 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Nfe2l2Q60795 597 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 TdrkhQ80VL1 560 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Cyth4Q80YW0 393 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Eif2aQ8BJW6 581 aaKnown RBP8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Pak5Q8C015 719 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Ccdc159Q8C963 411 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Fbxo33Q8VE08 562 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 Olfr1353Q8VGU8 309 aa8.07□□□□□ -1.12
Ccdc39-201ENSMUST00000029222 MceeQ9D1I5 178 aa8.07□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms