RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 OTUD1Q5VV17 481 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-230ENST00000641927 SND1Q7KZF4 910 aaKnown RBP eCLIP18.21■□□□□ 0.511e-7■■■□□ 18.8
PHGDH-230ENST00000641927 ZNF592Q92610 1267 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 CENPIQ92674 756 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-230ENST00000641927 TCEAL4Q96EI5 215 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 SERPINB11Q96P15 392 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
PHGDH-230ENST00000641927 DNMT3LQ9UJW3 386 aa18.21■□□□□ 0.51
PHGDH-230ENST00000641927 ZNF197O14709 1029 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 PRPSAP2O60256 369 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 F9P00740 461 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 TCF4P15884 667 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 HOXB8P17481 243 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-230ENST00000641927 MIPP30301 263 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 TUBP50607 506 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 HADHQ16836 314 aaKnown RBP18.2■□□□□ 0.5
PHGDH-230ENST00000641927 SLC5A9Q2M3M2 681 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 ARHGAP15Q53QZ3 475 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 MSANTD2Q6P1R3 559 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 SYCE2Q6PIF2 218 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 FAM131BQ86XD5 332 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 DEFB123Q8N688 67 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 ARFGAP1Q8N6T3 406 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 MAB21L3Q8N8X9 362 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 SHKBP1Q8TBC3 707 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 NCAPGQ9BPX3 1015 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 SLITRK6Q9H5Y7 841 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 ZWILCHQ9H900 591 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 PIGVQ9NUD9 493 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 USP18Q9UMW8 372 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 MRPS23Q9Y3D9 190 aaKnown RBP18.2■□□□□ 0.5
PHGDH-230ENST00000641927 JRKLQ9Y4A0 524 aa18.2■□□□□ 0.5
PHGDH-230ENST00000641927 SLC12A8A0AV02 714 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 NRG2O14511 850 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-230ENST00000641927 IRAK2O43187 625 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 TBX10O75333 385 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 OAS1P00973 400 aaKnown RBP18.19■□□□□ 0.5
PHGDH-230ENST00000641927 HDCP19113 662 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 CASQ1P31415 396 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 PCK1P35558 622 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 TAS2R40P59535 323 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 DLX2Q07687 328 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-230ENST00000641927 TEAD2Q15562 447 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 CCDC85BQ15834 202 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-230ENST00000641927 STXBP5Q5T5C0 1151 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 MEI1Q5TIA1 1274 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 CES5AQ6NT32 575 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 GPR153Q6NV75 609 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 GPR149Q86SP6 731 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 RHOT1Q8IXI2 618 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 CYP2S1Q96SQ9 504 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 RNF38Q9H0F5 515 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 CLEC1BQ9P126 229 aa18.19■□□□□ 0.5
PHGDH-230ENST00000641927 CTAGE9A4FU28 777 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 KIF2AO00139 706 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 CKMP06732 381 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 HMBSP08397 361 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 MBL2P11226 248 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 RPS6KA1Q15418 735 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 CTC1Q2NKJ3 1217 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 SMTNL2Q2TAL5 461 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 GPR158Q5T848 1215 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 ZNF276Q8N554 614 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 UBL4BQ8N7F7 174 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 ARL14EPQ8N8R7 260 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 ING5Q8WYH8 240 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 PGAP3Q96FM1 320 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 NAPGQ99747 312 aaPredicted RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 WDCPQ9H6R7 721 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 CDH22Q9UJ99 828 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 TRAV19A0A0A6YYK7 116 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 ENDOD1O94919 500 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 IGLV3-25P01717 112 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 ATP1A1P05023 1023 aaKnown RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 FOSL2P15408 326 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 TBX4P57082 545 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 SKIV2LQ15477 1246 aaKnown RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 KCNT1Q5JUK3 1230 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 PRSS36Q5K4E3 855 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 KLHDC10Q6PID8 442 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 BNIPLQ7Z465 357 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 TTC16Q8NEE8 873 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 KRT35Q92764 455 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 PABPC5Q96DU9 382 aaKnown RBP18.18■□□□□ 0.5
PHGDH-230ENST00000641927 SLC22A12Q96S37 553 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 PSMB7Q99436 277 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 ADAM7Q9H2U9 754 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 SMPD4Q9NXE4 827 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 TLR6Q9Y2C9 796 aa18.18■□□□□ 0.5
PHGDH-230ENST00000641927 DOCK6Q96HP0 2047 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 CCDC66A2RUB6 948 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
PHGDH-230ENST00000641927 PSTPIP1O43586 416 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 PAPLNO95428 1278 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 TUBB4AP04350 444 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 KRT7P08729 469 aa18.17■□□□□ 0.5
PHGDH-230ENST00000641927 CEBPBP17676 345 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms