RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 RRN3P2A6NIE6 340 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 AKAP8O43823 692 aaKnown RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 HIP1RO75146 1068 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 DGKIO75912 1065 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 C22orf31O95567 290 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 FGBP02675 491 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 VTNP04004 478 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 QARSP47897 775 aaKnown RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 SLC26A2P50443 739 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 DNM2P50570 870 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 GNG11P61952 73 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 PSMC5P62195 406 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 PPP2R2AP63151 447 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 AMPD3Q01432 767 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 SPAG1Q07617 926 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 MGAT3Q09327 533 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 PPIGQ13427 754 aaKnown RBP eCLIP6.51□□□□□ -1.377e-6■■□□□ 12.3
ATM-229ENST00000639953 DRP2Q13474 957 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 MAN2A1Q16706 1144 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 FILIP1LQ4L180 1135 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 ZNF484Q5JVG2 852 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 FAM109BQ6ICB4 259 aaPredicted RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 ANO5Q75V66 913 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 KIAA0319LQ8IZA0 1049 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 TDHQ8IZJ6 230 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 METTL13Q8N6R0 699 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 CCDC112Q8NEF3 446 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 RDM1Q8NG50 284 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 OR8K1Q8NGG5 319 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 CAGE1Q8TC20 777 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 ZCCHC14Q8WYQ9 949 aaKnown RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 ZBTB9Q96C00 473 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 RNPC3Q96LT9 517 aaKnown RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 CEP89Q96ST8 783 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 LXNQ9BS40 222 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 LSM14BQ9BX40 385 aaKnown RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 TMEM168Q9H0V1 697 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 FAM207AQ9NSI2 230 aaPredicted RBP6.51□□□□□ -1.37
ATM-229ENST00000639953 NRBP2Q9NSY0 501 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 DMAC2Q9NW81 257 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 DNM3Q9UQ16 869 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 CDY2AQ9Y6F7 541 aa6.51□□□□□ -1.37
ATM-229ENST00000639953 PHLPP2Q6ZVD8 1323 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 CEP290O15078 2479 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 COL1A2P08123 1366 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 SMIM35A0A1B0GVV1 85 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 A0A1W2PQU0 124 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 BICDL2A1A5D9 508 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 LRRC53A6NM62 1247 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 GRXCR1A8MXD5 290 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 ANKRD63C9JTQ0 380 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 PES1O00541 588 aaKnown RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 LAMTOR5O43504 91 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 SRGAP2O75044 1071 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 URI1O94763 535 aaPredicted RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 NDUFA10O95299 355 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 SLU7O95391 586 aaKnown RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 GHRP10912 638 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 HNRNPH3P31942 346 aaKnown RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 YWHABP31946 246 aaKnown RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 ZNF131P52739 623 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 ICAM4Q14773 271 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 BMT2Q1RMZ1 405 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 XKR9Q5GH70 373 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 XKR3Q5GH77 459 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 ZNF569Q5MCW4 686 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 EFCAB12Q6NXP0 572 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 TAF2Q6P1X5 1199 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 FBXO38Q6PIJ6 1188 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 RSRC2Q7L4I2 434 aaKnown RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 ZNF720Q7Z2F6 126 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 SPRED1Q7Z699 444 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 TMCO2Q7Z6W1 182 aaPredicted RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 TMTC1Q8IUR5 882 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 CCDC65Q8IXS2 484 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 TTC9BQ8N6N2 239 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 LINC01465Q8N7H1 131 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 KIF18AQ8NI77 898 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 FAM167AQ96KS9 214 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 CEP170P1Q96L14 293 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 PACSIN1Q9BY11 444 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 SMOC1Q9H4F8 434 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 ZSWIM4Q9H7M6 989 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 NHEJ1Q9H9Q4 299 aaPredicted RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 TUFT1Q9NNX1 390 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 NLRC4Q9NPP4 1024 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 SMARCAL1Q9NZC9 954 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 EHD2Q9NZN4 543 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 MYOTQ9UBF9 498 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 NENFQ9UMX5 172 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 GINS2Q9Y248 185 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 LUC7L2Q9Y383 392 aaKnown RBP6.5□□□□□ -1.37
ATM-229ENST00000639953 COL4A3BPQ9Y5P4 624 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 MICAL3Q7RTP6 2002 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 KDM3AQ9Y4C1 1321 aa6.5□□□□□ -1.37
ATM-229ENST00000639953 COL6A3P12111 3177 aa6.49□□□□□ -1.37
ATM-229ENST00000639953 PRUNE2Q8WUY3 3088 aa6.49□□□□□ -1.37
ATM-229ENST00000639953 C1QTNF3-AMACRE9PGA6 284 aa6.49□□□□□ -1.37
ATM-229ENST00000639953 ZNF185O15231 689 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms