RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ULBP1Q9BZM6 244 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 UBXN6Q9BZV1 441 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 FBXO44Q9H4M3 255 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ACP6Q9NPH0 428 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ARHGEF4Q9NR80 690 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 TLR8Q9NR97 1041 aaKnown RBP8.24□□□□□ -1.09
PNKP-229ENST00000637897 PLK2Q9NYY3 685 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 EHD2Q9NZN4 543 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 IMPACTQ9P2X3 320 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 GMEB2Q9UKD1 530 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 TSPAN16Q9UKR8 245 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
PNKP-229ENST00000637897 PI4KAP42356 2102 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ACACBO00763 2458 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 ATP8B3O60423 1300 aa8.24□□□□□ -1.09
PNKP-229ENST00000637897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 YJEFN3A6XGL0 299 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 PATE3B3GLJ2 98 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 WASH3PC4AMC7 463 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 E7ENQ6 273 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 SLC9A3R1O14745 358 aaPredicted RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 SLC30A4O14863 429 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 CACNG3O60359 315 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 PENKP01210 267 aaPredicted RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 ZNF806P0C7X5 589 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 TYRP14679 529 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 GABRG2P18507 467 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 ATP5C1P36542 298 aaKnown RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 P2RY2P41231 377 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 WASP42768 502 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 TNFRSF4P43489 277 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 SGSHP51688 502 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 STX17P56962 302 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 GSDMDP57764 484 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 MRPS21P82921 87 aaKnown RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 AMPD2Q01433 879 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 GAD2Q05329 585 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 LRRC63Q05C16 580 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 NR1H3Q13133 447 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 PPP2R5DQ14738 602 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 GOLGA7BQ2TAP0 167 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 PMS2CLQ68D20 193 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 ANO7Q6IWH7 933 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 PMF1Q6P1K2 205 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 TPGS1Q6ZTW0 290 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 CEP68Q76N32 757 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 CACNA2D4Q7Z3S7 1137 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 DDX42Q86XP3 938 aaKnown RBP eCLIP8.23□□□□□ -1.09
PNKP-229ENST00000637897 FAM217AQ8IXS0 508 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 TERB1Q8NA31 727 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 ENOX1Q8TC92 643 aaKnown RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 CLEC4CQ8WTT0 213 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 SLC35F5Q8WV83 523 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 NELFBQ8WX92 580 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 CCDC47Q96A33 483 aaKnown RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 OTUB2Q96DC9 234 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 DHTKD1Q96HY7 919 aaPredicted RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 LOXL4Q96JB6 756 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 SLC6A17Q9H1V8 727 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 TMEM74BQ9NUR3 256 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 CLIC5Q9NZA1 410 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 TBC1D14Q9P2M4 693 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 ARMCX3Q9UH62 379 aaPredicted RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 CYTH4Q9UIA0 394 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 NAGPAQ9UK23 515 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 AJAP1Q9UKB5 411 aaPredicted RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 AGO1Q9UL18 857 aaKnown RBP8.23□□□□□ -1.09
PNKP-229ENST00000637897 SH3BP1Q9Y3L3 701 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 NUMA1Q14980 2115 aa8.23□□□□□ -1.09
PNKP-229ENST00000637897 KNL1Q8NG31 2342 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 BCLAF3A2AJT9 711 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 NEDD8-MDP1E9PL57 170 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 PIK3R2O00459 728 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 CDX4O14627 284 aaPredicted RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 XPO1O14980 1071 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 CLSTN1O94985 981 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 ADH1CP00326 375 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 APODP05090 189 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 MPLP40238 635 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 PPP1R2P41236 205 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 PTGER3P43115 390 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 RPL34P49207 117 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 TKTL1P51854 596 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 DGKEP52429 567 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 FANCCQ00597 558 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 LMNB2Q03252 620 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 EFEMP1Q12805 493 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 ENPP2Q13822 863 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 TRIP4Q15650 581 aaPredicted RBP8.22□□□□□ -1.09
PNKP-229ENST00000637897 GEN1Q17RS7 908 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 ANO4Q32M45 955 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 C10orf120Q5SQS8 335 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 TCERG1LQ5VWI1 586 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 RNF43Q68DV7 783 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 KLHL10Q6JEL2 608 aa8.22□□□□□ -1.09
PNKP-229ENST00000637897 GJB7Q6PEY0 223 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms