RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 RPL22P35268 128 aaKnown RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 PPARDQ03181 441 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 IFFO1Q0D2I5 559 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 SLC10A2Q12908 348 aaPredicted RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 SLMAPQ14BN4 828 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 NPAS4Q8IUM7 802 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 APBB2Q92870 758 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 FRMD8P1Q9BZ68 369 aaPredicted RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM129AQ9BZQ8 928 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 ZCWPW1Q9H0M4 648 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 TMBIM4Q9HC24 238 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 DDIT4Q9NX09 232 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 USP3Q9Y6I4 520 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 TTC3P53804 2025 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 SMIM23A6NLE4 172 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 MTM1Q13496 603 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 MAPRE1Q15691 268 aaKnown RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 HP1BP3Q5SSJ5 553 aaPredicted RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 ANKRD22Q5VYY1 191 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 CCHCR1Q8TD31 782 aa22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 BCL7CQ8WUZ0 217 aaPredicted RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 WDR6Q9NNW5 1121 aaKnown RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 TPX2Q9ULW0 747 aaKnown RBP22.5■■□□□ 1.19
CHRNA7-228ENST00000637519 CREB3O43889 395 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 MYZAPP0CAP1 466 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 TGM2P21980 687 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 ARPP19P56211 112 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 KRT71Q3SY84 523 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 SYCP2LQ5T4T6 812 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 RNASEH2BQ5TBB1 312 aaKnown RBP22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 BSPRYQ5W0U4 402 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 C4orf50Q6ZRC1 276 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 CRISPLD2Q9H0B8 497 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 NR2E3Q9Y5X4 410 aa22.49■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM72CH0Y354 149 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 TRAPPC3O43617 180 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 CXCL10P02778 98 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 CTCFP49711 727 aaPredicted RBP22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 CAV1Q03135 178 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 CTXN3Q4LDR2 81 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM72AQ5TYM5 149 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 NCBP2-AS2Q69YL0 99 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 PM20D1Q6GTS8 502 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM72DQ6L9T8 149 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 TMCO2Q7Z6W1 182 aaPredicted RBP22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM72BQ86X60 149 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 BCCIPQ9P287 314 aaKnown RBP eCLIP22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 TCRBV7S3A2A0A539 114 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 SOAT2O75908 522 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 NUDT17P0C025 328 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 RBL1P28749 1068 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 KYNUQ16719 465 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 DDR2Q16832 855 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 SPDYCQ5MJ68 293 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 TAC4Q86UU9 113 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 BBOF1Q8ND07 529 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM76AQ8TAV0 307 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 GPR152Q8TDT2 470 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 C9orf72Q96LT7 481 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 SNX10Q9Y5X0 201 aa22.48■■□□□ 1.19
CHRNA7-228ENST00000637519 KCNN4O15554 427 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 BANF1O75531 89 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 ALDH2P05091 517 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 FASTKD3Q14CZ7 662 aaKnown RBP22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 RSPO2Q6UXX9 243 aaPredicted RBP22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 TAS1R1Q7RTX1 841 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 ZCCHC9Q8N567 271 aaKnown RBP22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 ATAD1Q8NBU5 361 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 RNF139Q8WU17 664 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 CPT1BQ92523 772 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 VWCEQ96DN2 955 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 ATP6V1G3Q96LB4 118 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 ARHGEF4Q9NR80 690 aa22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.47■■□□□ 1.19
CHRNA7-228ENST00000637519 GOLGA6L10A6NI86 522 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 TNFRSF10BO14763 440 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 SLCO1A2P46721 670 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 RTP2Q5QGT7 225 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 FUT10Q6P4F1 479 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 VSIG1Q86XK7 387 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 EPS8L3Q8TE67 593 aaKnown RBP22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 PRCCQ92733 491 aaPredicted RBP22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 ZNF333Q96JL9 665 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 RBM15Q96T37 977 aaKnown RBP eCLIP22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 USP29Q9HBJ7 922 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 NINJ2Q9NZG7 142 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 NUDT5Q9UKK9 219 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 ZNF638Q14966 1978 aaKnown RBP22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 SYN3O14994 580 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 GALTP07902 379 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 ARL4AP40617 200 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 FARP1Q9Y4F1 1045 aaPredicted RBP22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 PATJQ8NI35 1801 aa22.46■■□□□ 1.19
CHRNA7-228ENST00000637519 TLDC2A0PJX2 215 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 MFSD11O43934 449 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 BASP1P80723 227 aaKnown RBP22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 EFHC2Q5JST6 749 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 DQX1Q8TE96 717 aaKnown RBP22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 PNPLA8Q9NP80 782 aa22.45■■□□□ 1.18
CHRNA7-228ENST00000637519 DTLQ9NZJ0 730 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms