RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 RIPOR1Q6ZS17 1223 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 DACH2Q96NX9 599 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 TBCBQ99426 244 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 E5RJQ4 531 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 PLIN5Q00G26 463 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 SLC1A5Q15758 541 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 ZPBP2Q6X784 338 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
CLN5-218ENST00000637397 UNC45BQ8IWX7 931 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 OR6Y1Q8NGX8 325 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 FAM136AQ96C01 138 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 TMEM79Q9BSE2 394 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 EIF2AQ9BY44 585 aaKnown RBP16.33■□□□□ 0.2
CLN5-218ENST00000637397 TJP2Q9UDY2 1190 aa16.33■□□□□ 0.2
CLN5-218ENST00000637397 UBQLN1Q9UMX0 589 aaKnown RBP16.33■□□□□ 0.2
CLN5-218ENST00000637397 PGK2P07205 417 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 SPDYAQ5MJ70 313 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 SPATA2LQ8IUW3 424 aaPredicted RBP16.32■□□□□ 0.2
CLN5-218ENST00000637397 B4GALNT2Q8NHY0 566 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 TRAPPC9Q96Q05 1148 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 GRHL1Q9NZI5 618 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 MRC1P22897 1456 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 SIGLEC16A6NMB1 481 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 SLCO1B7G3V0H7 640 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 TBC1D4O60343 1298 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 USP12O75317 370 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 CYP2C9P11712 490 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 YY1P25490 414 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 GSTT1P30711 240 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 SERPINB10P48595 397 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 CRADDP78560 199 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 MRPS22P82650 360 aaKnown RBP16.32■□□□□ 0.2
CLN5-218ENST00000637397 NOTUMQ6P988 496 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 KYAT3Q6YP21 454 aaKnown RBP16.32■□□□□ 0.2
CLN5-218ENST00000637397 CLNKQ7Z7G1 428 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ALYREFQ86V81 257 aaKnown RBP16.32■□□□□ 0.2
CLN5-218ENST00000637397 SHISA4Q96DD7 197 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 PRPF18Q99633 342 aaKnown RBP16.32■□□□□ 0.2
CLN5-218ENST00000637397 FAM192AQ9GZU8 254 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ZNF23P17027 643 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ETFBP38117 255 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ABCG1P45844 678 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 PKNOX1P55347 436 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 CSHL1Q14406 222 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ADCK1Q86TW2 530 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 OR5B17Q8NGF7 314 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 MECRQ9BV79 373 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 CATSPERBQ9H7T0 1116 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ARL8BQ9NVJ2 186 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 GOLGA8TH3BQL2 631 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ZMPSTE24O75844 475 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 PHF13Q86YI8 300 aaPredicted RBP16.32■□□□□ 0.2
CLN5-218ENST00000637397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLN5-218ENST00000637397 TMEM109Q9BVC6 243 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 ETNK2Q9NVF9 386 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
CLN5-218ENST00000637397 RICTORQ6R327 1708 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 M0R3G1 203 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 VWA5AO00534 786 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 RGL2O15211 777 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 DEAF1O75398 565 aaPredicted RBP16.31■□□□□ 0.2
CLN5-218ENST00000637397 SMNDC1O75940 238 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLN5-218ENST00000637397 PAEPP09466 180 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 CTSHP09668 335 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 PTGIRP43119 386 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 BBS12Q6ZW61 710 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 ARHGAP22Q7Z5H3 698 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 TRAPPC12Q8WVT3 735 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 C12orf65Q9H3J6 166 aaKnown RBP16.31■□□□□ 0.2
CLN5-218ENST00000637397 COPS7BQ9H9Q2 264 aaPredicted RBP16.31■□□□□ 0.2
CLN5-218ENST00000637397 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
CLN5-218ENST00000637397 AVILO75366 819 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 ATICP31939 592 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 TMED10P49755 219 aaKnown RBP16.31■□□□□ 0.2
CLN5-218ENST00000637397 CCDC153Q494R4 210 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 EFHBQ8N7U6 833 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 LRRN4Q8WUT4 740 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 ZMAT2Q96NC0 199 aaKnown RBP16.31■□□□□ 0.2
CLN5-218ENST00000637397 CD274Q9NZQ7 290 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 AP4S1Q9Y587 144 aa16.31■□□□□ 0.2
CLN5-218ENST00000637397 TCRBV9S1A1TA0A576 114 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 ANPEPP15144 967 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 ME2P23368 584 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 CDC42EP1Q00587 391 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 PRKAA1Q13131 559 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 FASTKD5Q7L8L6 764 aaKnown RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 PIGWQ7Z7B1 504 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 EFCAB3Q8N7B9 438 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 DDHD1Q8NEL9 900 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 USP6NLQ92738 828 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 LRRC39Q96DD0 335 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 ZCWPW1Q9H0M4 648 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 CASS4Q9NQ75 786 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 SAC3D1A6NKF1 404 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 RNF103O00237 685 aa16.3■□□□□ 0.2
CLN5-218ENST00000637397 EN1Q05925 392 aaPredicted RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 FASTKD3Q14CZ7 662 aaKnown RBP16.3■□□□□ 0.2
CLN5-218ENST00000637397 LPCAT2Q7L5N7 544 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms