RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 OAS1P00973 400 aaKnown RBP11.96□□□□□ -0.49
CLN6-217ENST00000636964 IFNB1P01574 187 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 ATF2P15336 505 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 CHKAP35790 457 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 CDH6P55285 790 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.49
CLN6-217ENST00000636964 TOP6BLQ8N6T0 577 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 SLCO2A1Q92959 643 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 RSAD1Q9HA92 442 aa11.96□□□□□ -0.49
CLN6-217ENST00000636964 PRPSAP2O60256 369 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 SDC4P31431 198 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 BRCC3P46736 316 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 VEGFBP49765 207 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 NDUFV1P49821 464 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 OTUD4Q01804 1114 aaKnown RBP11.96□□□□□ -0.5
CLN6-217ENST00000636964 PTK7Q13308 1070 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 PTK6Q13882 451 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 LRRC23Q53EV4 343 aaPredicted RBP11.96□□□□□ -0.5
CLN6-217ENST00000636964 ANO7Q6IWH7 933 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 LIMS2Q7Z4I7 341 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 PIGZQ86VD9 579 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 ACTL9Q8TC94 416 aa11.96□□□□□ -0.5
CLN6-217ENST00000636964 SMIM23A6NLE4 172 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 LIN7AO14910 233 aaPredicted RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 B3GAT3O94766 335 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 WARSP23381 471 aaKnown RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 MMP13P45452 471 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 COPS2P61201 443 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 SLC29A2Q14542 456 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 TIGD5Q53EQ6 642 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 CWF19L1Q69YN2 538 aaKnown RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 SMYD5Q6GMV2 418 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 NPNTQ6UXI9 565 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 PAQR9Q6ZVX9 377 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 CYP4V2Q6ZWL3 525 aaPredicted RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 CCHCR1Q8TD31 782 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 SNF8Q96H20 258 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 EPAS1Q99814 870 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 ECT2Q9H8V3 914 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 ZFATQ9P243 1243 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 GIT1Q9Y2X7 761 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 NEU2Q9Y3R4 380 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 A0A0U1RQF3 1178 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 MYBPHLA2RUH7 354 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 CFAP73A6NFT4 308 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 AHCYL1O43865 530 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 MAP3K6O95382 1288 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 YY1P25490 414 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 MAP3K7CLP57077 242 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 ADIGQ0VDE8 80 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 MTMR3Q13615 1198 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 TRIM71Q2Q1W2 868 aaKnown RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 CMASQ8NFW8 434 aaPredicted RBP11.95□□□□□ -0.5
CLN6-217ENST00000636964 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 OSBPL1AQ9BXW6 950 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 ANAPC5Q9UJX4 755 aa11.95□□□□□ -0.5
CLN6-217ENST00000636964 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 SGK1O00141 431 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 CKBP12277 381 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 CTCFP49711 727 aaPredicted RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 CCNG1P51959 295 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 NRLP54845 237 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 CA9Q16790 459 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 P3H1Q32P28 736 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 LHX8Q68G74 356 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 FAAH2Q6GMR7 532 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 CTU1Q7Z7A3 348 aaKnown RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 MIPOL1Q8TD10 442 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 UTP4Q969X6 686 aaKnown RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 RHOBTB2Q9BYZ6 727 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 COX16Q9P0S2 106 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 CASP8AP2Q9UKL3 1982 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 TLDC2A0PJX2 215 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 TPPPO94811 219 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 ITIH2P19823 946 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 CCND1P24385 295 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 PCK1P35558 622 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 ARSEP51690 589 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 DEUP1Q05D60 604 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 DSC3Q14574 896 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 UPP1Q16831 310 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 IZUMO3Q5VZ72 239 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 ASRGL1Q7L266 308 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 MRPL10Q7Z7H8 261 aaKnown RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 SH3TC2Q8TF17 1288 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 ZNF296Q8WUU4 475 aaPredicted RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 KCNK16Q96T55 309 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 WHRNQ9P202 907 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 A0A1W2PQ45 241 aaPredicted RBP11.94□□□□□ -0.5
CLN6-217ENST00000636964 A0A1W2PQY0 241 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 GABRDO14764 452 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 ITGB1P05556 798 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 APLP1P51693 650 aa11.94□□□□□ -0.5
CLN6-217ENST00000636964 MBTPS1Q14703 1052 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms