RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CXorf40AQ8TE69 158 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 FERD3LQ96RJ6 166 aa18.32■□□□□ 0.52
CACNA1A-227ENST00000636549 MAPKAPK2P49137 400 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 NR6A1Q15406 480 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 INAQ16352 499 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 RUSC1Q9BVN2 902 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF624Q9P2J8 865 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 RAB14P61106 215 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 PFKPQ01813 784 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 RHAGQ02094 409 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 TGM3Q08188 693 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 NCF4Q15080 339 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 ZCCHC8Q6NZY4 707 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 KLHL23Q8NBE8 558 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 MOSPD2Q8NHP6 518 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 SH3GL1Q99961 368 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 KCTD14Q9BQ13 255 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 OSBPL8Q9BZF1 889 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 FAM86B1E9PN63 330 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 SEPT4O43236 478 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 CCT8P50990 548 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 RNF31Q96EP0 1072 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 ADGRE3Q9BY15 652 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 UBXN6Q9BZV1 441 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 PAK5Q9P286 719 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 PTCH1Q13635 1447 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 IL1BP01584 269 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 ALAS2P22557 587 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 ADIGQ0VDE8 80 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 LAMB3Q13751 1172 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 MRNIPQ6NTE8 343 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 DPF2Q92785 391 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 TMEM191CA6NGB0 347 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 TRIM49D1C9J1S8 452 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 EPORP19235 508 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 DYNC1I2Q13409 638 aaKnown RBP18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 PTPN20Q4JDL3 420 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 SDHAF4Q5VUM1 108 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 HPS6Q86YV9 775 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 SUSD6Q92537 303 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 USP17L7P0C7H9 530 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 GCLCP48506 637 aaPredicted RBP18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 TMEM159Q96B96 161 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 DUSP12Q9UNI6 340 aa18.31■□□□□ 0.52
CACNA1A-227ENST00000636549 PSMD9O00233 223 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF24P17028 368 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 AMPD2Q01433 879 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 GPAT3Q53EU6 434 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 AGMOQ6ZNB7 445 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 MARK4Q96L34 752 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 TBX20Q9UMR3 447 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 SLC27A5Q9Y2P5 690 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 TMEM150BA6NC51 233 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ZW10O43264 779 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ANXA9O76027 345 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 HIST1H2ABP04908 130 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 UCHL3P15374 230 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 PLK1P53350 603 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 MAPK11Q15759 364 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 RAET1GQ6H3X3 334 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF280DQ6N043 979 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 HIST3H2AQ7L7L0 130 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ALLCQ8N6M5 410 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 EFCAB3Q8N7B9 438 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 HIST1H2ACQ93077 130 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 SAE1Q9UBE0 346 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 NT5C1B-RDH14C9J2C7 533 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ANXA11P50995 505 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ATAD3BQ5T9A4 648 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 UBASH3BQ8TF42 649 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 LPAR1Q92633 364 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 E2F7Q96AV8 911 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 ATP13A1Q9HD20 1204 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 RGS18Q9NS28 235 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 PDS5AQ29RF7 1337 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 SAC3D1A6NKF1 404 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 RBP3P10745 1247 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 PDHBP11177 359 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 SOX6P35712 828 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 KLHL17Q6TDP4 642 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 REXO5Q96IC2 774 aaKnown RBP18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 PRMT6Q96LA8 375 aaPredicted RBP18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 MKNK1Q9BUB5 465 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 VPS45Q9NRW7 570 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 H0Y858 1186 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 FOXO4P98177 505 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 STAT4Q14765 748 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 SNX30Q5VWJ9 437 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 PRR23BQ6ZRT6 265 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 MYPNQ86TC9 1320 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
CACNA1A-227ENST00000636549 NEO1Q92859 1461 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 BDNFP23560 247 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ADARB2Q9NS39 739 aaKnown RBP18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 PVALEFA0A1B0GWK0 134 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 MMRN1Q13201 1228 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 SPIDRQ14159 915 aa18.29■□□□□ 0.52
CACNA1A-227ENST00000636549 ILDR2Q71H61 639 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms