RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 BCLAF3A2AJT9 711 aaKnown RBP18.79■□□□□ 0.6
PNKP-225ENST00000636214 GREM1O60565 184 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 SETSIPP0DME0 302 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 LIMK1P53667 647 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 PDE4CQ08493 712 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 PPM1JQ5JR12 505 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 RAB41Q5JT25 222 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 PLA2G2CQ5R387 149 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 RNF43Q68DV7 783 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 Q6ZNB5 142 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 PPM1KQ8N3J5 372 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 RNF139Q8WU17 664 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 ULBP1Q9BZM6 244 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 PLK2Q9NYY3 685 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 PCDHB4Q9Y5E5 795 aa18.79■□□□□ 0.6
PNKP-225ENST00000636214 BIN1O00499 593 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 P4HA2O15460 535 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 ADAM23O75077 832 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 FGFR1OPO95684 399 aaKnown RBP18.78■□□□□ 0.6
PNKP-225ENST00000636214 GNA14O95837 355 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 PAEPP09466 180 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 HNRNPLP14866 589 aaKnown RBP eCLIP18.78■□□□□ 0.6
PNKP-225ENST00000636214 BCKDHBP21953 392 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 WASP42768 502 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 ADIGQ0VDE8 80 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 PAK1Q13153 545 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 E2F5Q15329 346 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 STPG1Q5TH74 334 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 UCMAQ8WVF2 138 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 RLN3Q8WXF3 142 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 PLD4Q96BZ4 506 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 EDEM2Q9BV94 578 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 STARD13Q9Y3M8 1113 aa18.78■□□□□ 0.6
PNKP-225ENST00000636214 KHNYNO15037 678 aaKnown RBP18.77■□□□□ 0.6
PNKP-225ENST00000636214 TRIM24O15164 1050 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 PMM2O15305 246 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
PNKP-225ENST00000636214 P2RY2P41231 377 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 DPP6P42658 865 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 HARS2P49590 506 aaKnown RBP18.77■□□□□ 0.6
PNKP-225ENST00000636214 STILQ15468 1287 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 EGFLAMQ63HQ2 1017 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 DENND1CQ8IV53 801 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 OLIG1Q8TAK6 271 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 UBA3Q8TBC4 463 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 PIGKQ92643 395 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 GOLGA1Q92805 767 aa18.77■□□□□ 0.6
PNKP-225ENST00000636214 M0QYV0 167 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 LCP1P13796 627 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 MORC3Q14149 939 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 STARD3Q14849 445 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 PM20D1Q6GTS8 502 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 TCEAL6Q6IPX3 200 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 TTI2Q6NXR4 508 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 FOXR2Q6PJQ5 311 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 SLC36A4Q6YBV0 504 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 TCEAL3Q969E4 200 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 CNGB3Q9NQW8 809 aa18.76■□□□□ 0.59
PNKP-225ENST00000636214 AGO1Q9UL18 857 aaKnown RBP18.76■□□□□ 0.59
PNKP-225ENST00000636214 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.76■□□□□ 0.59
PNKP-225ENST00000636214 PPP1R3GB7ZBB8 358 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 TULP2O00295 520 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 O00370 1275 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 AP5Z1O43299 807 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 ZNF217O75362 1048 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 CHRM1P11229 460 aaPredicted RBP18.75■□□□□ 0.59
PNKP-225ENST00000636214 PI4KAP42356 2102 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 STX17P56962 302 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 ARID5AQ03989 594 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 LCLAT1Q6UWP7 414 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 TOGARAM2Q6ZUX3 1019 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 ARMCX6Q7L4S7 300 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 FMNL3Q8IVF7 1028 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 DDI1Q8WTU0 396 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 ABCC13Q9NSE7 274 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 CALCOCO1Q9P1Z2 691 aa18.75■□□□□ 0.59
PNKP-225ENST00000636214 PLXND1Q9Y4D7 1925 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 PRRT4C9JH25 899 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 GFRA2O00451 464 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 NPC1O15118 1278 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 GADD45BO75293 160 aaPredicted RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 PENKP01210 267 aaPredicted RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 AFPP02771 609 aaKnown RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 KLKB1P03952 638 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 ZNF445P59923 1031 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 RPL6Q02878 288 aaKnown RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 KCNH2Q12809 1159 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 SPDYCQ5MJ68 293 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 DAB2IPQ5VWQ8 1189 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 LYSMD4Q5XG99 296 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 ANKS1BQ7Z6G8 1248 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 TMEFF1Q8IYR6 380 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 CPXM2Q8N436 756 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 UBR7Q8N806 425 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 RBBP8NLQ8NC74 664 aaPredicted RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 IPO4Q8TEX9 1081 aaKnown RBP18.74■□□□□ 0.59
PNKP-225ENST00000636214 KCTD13Q8WZ19 329 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 EDEM1Q92611 657 aa18.74■□□□□ 0.59
PNKP-225ENST00000636214 NUSAP1Q9BXS6 441 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms