RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 PRAG1Q86YV5 1406 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 KIF26AQ9ULI4 1882 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PTPRQQ9UMZ3 2332 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TNRC18O15417 2968 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 JMJD1CQ15652 2540 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 IGLV7-46A0A075B6I9 117 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 A0A1B0GVT2 93 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 BCLAF3A2AJT9 711 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 MTMR11A4FU01 709 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 C2orf78A6NCI8 922 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PALM3A6NDB9 673 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 USP27XA6NNY8 438 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 A8MU76 341 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TMEM232C9JQI7 657 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 INAFM1C9JVW0 142 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 K7N7A8 449 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PDXKO00764 312 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TGFB1I1O43294 461 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ZSCAN12O43309 604 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SRPX2O60687 465 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PHACTR2O75167 634 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 H2AFYO75367 372 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ERN1O75460 977 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 GCATO75600 419 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RBBP9O75884 186 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TOX4O94842 621 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TRIM37O94972 964 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 MOCS3O95396 460 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 AIFM1O95831 613 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 C6orf47O95873 294 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 JUNP05412 331 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 IGKV5-2P06315 115 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RETP07949 1114 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 POU2F2P09086 479 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 FAM200BP0CF97 657 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SRCP12931 536 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 FOLR2P14207 255 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 HSP90B1P14625 803 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CRISP2P16562 243 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 BCL3P20749 454 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 GLRA1P23415 457 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 MGAT1P26572 445 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SOX3P41225 446 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RGRP47804 291 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RXRGP48443 463 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 HAP1P54257 671 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SESN2P58004 480 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 IL13RA1P78552 427 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 IGLV3-21P80748 117 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RBM3P98179 157 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ACVR1Q04771 509 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PTPN12Q05209 780 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 GRIN1Q05586 938 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SNTA1Q13424 505 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SERTAD2Q14140 314 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TTLL12Q14166 644 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 HNF4GQ14541 408 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 NR1D2Q14995 579 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PTPN21Q16825 1174 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TUSC1Q2TAM9 212 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ITPRIPL2Q3MIP1 535 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TOR2AQ5JU69 321 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 LY6G6FQ5SQ64 297 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ZBTB41Q5SVQ8 909 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 AGAP9Q5VTM2 703 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 FCRL6Q6DN72 434 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 OVOS1Q6IE37 1185 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RETSATQ6NUM9 610 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ZCCHC8Q6NZY4 707 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CTR9Q6PD62 1173 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 DRICH1Q6PGQ1 229 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 NAPRTQ6XQN6 538 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PDZRN4Q6ZMN7 1036 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TRIM72Q6ZMU5 477 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CEACAM19Q7Z692 300 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 NECAB2Q7Z6G3 386 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 C11orf96Q7Z7L8 435 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SLC9B2Q86UD5 537 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CPNE8Q86YQ8 564 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 MCATQ8IVS2 390 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TEX2Q8IWB9 1127 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ETFBKMTQ8IXQ9 262 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 HS6ST3Q8IZP7 471 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CMTM4Q8IZR5 234 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 LSMEM2Q8N112 164 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CLASRPQ8N2M8 674 aaKnown RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 PAQR4Q8N4S7 273 aaPredicted RBP-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CERS5Q8N5B7 392 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ZNF614Q8N883 585 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 KBTBD3Q8NAB2 608 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TMIEQ8NEW7 156 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 ABHD11Q8NFV4 315 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 OR13A1Q8NGR1 328 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RHOXF1Q8NHV9 184 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 SLC30A5Q8TAD4 765 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 NUP133Q8WUM0 1156 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 TMEM171Q8WVE6 324 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 LPIN2Q92539 896 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 CTHRC1Q96CG8 243 aa-0.88□□□□□ -2.55
CDKL5-210ENST00000636046 RMI2Q96E14 147 aa-0.88□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms