RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 KCNA10Q16322 511 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 P3H1Q32P28 736 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 KIAA1614Q5VZ46 1190 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 MFSD5Q6N075 450 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SCYL2Q6P3W7 929 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 UNC5DQ6UXZ4 953 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 LRRC31Q6UY01 552 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 TAOK1Q7L7X3 1001 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SCUBE3Q8IX30 993 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 B3GALNT2Q8NCR0 500 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ARRDC4Q8NCT1 418 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ACTL9Q8TC94 416 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 FAM172AQ8WUF8 416 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 STON2Q8WXE9 905 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 CENPTQ96BT3 561 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 DUSP16Q9BY84 665 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 TSPYL2Q9H2G4 693 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 CDC42EP4Q9H3Q1 356 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SHOC2Q9UQ13 582 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SQORQ9Y6N5 450 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SCN1AP35498 2009 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 TRIP11Q15643 1979 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SCN10AQ9Y5Y9 1956 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PABPN1LA6NDY0 278 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PTGESO14684 152 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 TNRC18O15417 2968 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ADAMTS4O75173 837 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 CHRNA1P02708 482 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ASGR1P07306 291 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PTPN1P18031 435 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 TGM2P21980 687 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 LMO2P25791 158 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 HPDP32754 393 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PRMT2P55345 433 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 EIF3EP60228 445 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 DYNLT1P63172 113 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SOX4Q06945 474 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 NR1H3Q13133 447 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 STAT4Q14765 748 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PTGISQ16647 500 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 C4orf22Q6V702 233 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 DSTYKQ6XUX3 929 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 RNF180Q86T96 592 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SLC2A14Q8TDB8 520 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 P3H4Q92791 437 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ACSF2Q96CM8 615 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 HAUS1Q96CS2 278 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 SENP8Q96LD8 212 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 CFAP57Q96MR6 1250 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 RNF157Q96PX1 679 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 FAM118BQ9BPY3 351 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 DDX23Q9BUQ8 820 aaKnown RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 TMEM106CQ9BVX2 250 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 ARHGAP39Q9C0H5 1083 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 DPEP3Q9H4B8 488 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 AAASQ9NRG9 546 aa7.44□□□□□ -1.22
BRCA1-230ENST00000634433 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 RABL2AQ9UBK7 228 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-230ENST00000634433 PIK3R2O00459 728 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 GABRDO14764 452 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 TP73O15350 636 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 GRAP2O75791 330 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 FBXO21O94952 628 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 IFNB1P01574 187 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 SHBGP04278 402 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ABHD2P08910 425 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CCDC130P13994 396 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 IL4RP24394 825 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CHKAP35790 457 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 THPOP40225 353 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 MAGEA4P43358 317 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ATP11AP98196 1134 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 TSPY1Q01534 308 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ROR1Q01973 937 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CDO1Q16878 200 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 C15orf59Q2T9L4 293 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ERMARDQ5T6L9 678 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 GPR153Q6NV75 609 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CENPUQ71F23 418 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 STRADAQ7RTN6 431 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 MILR1Q7Z6M3 343 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PSTKQ8IV42 348 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PPIL6Q8IXY8 311 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 OR8H2Q8N162 312 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 RIBC1Q8N443 379 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 KCTD13Q8WZ19 329 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 CENPIQ92674 756 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 KHSRPQ92945 711 aaKnown RBP eCLIP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PAWRQ96IZ0 340 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 ZNF670Q9BS34 389 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 MED10Q9BTT4 135 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 GOLGA2P5Q9HBQ8 144 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 FNIP2Q9P278 1114 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 PDCD11Q14690 1871 aaKnown RBP7.43□□□□□ -1.22
BRCA1-230ENST00000634433 TULP2O00295 520 aa7.43□□□□□ -1.22
BRCA1-230ENST00000634433 APOL1O14791 398 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms