RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, human

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT1-223	ENST00000628857	LRRC46	Q96FV0	321 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	SGCZ	Q96LD1	299 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	FAM118B	Q9BPY3	351 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	ELAC2	Q9BQ52	826 aa	Known RBP	3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	PAAF1	Q9BRP4	392 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	PCDHAC1	Q9H158	963 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	NLRC4	Q9NPP4	1024 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	TERF2IP	Q9NYB0	399 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	DTNA	Q9Y4J8	743 aa		3.56	□□□□□ -1.84
CNOT1-223	ENST00000628857	SPATA31A5	Q5VU36	1347 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	SPATA31A7	Q8IWB4	1347 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	SMIM22	K7EJ46	135 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	CLIC1	O00299	241 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	DHH	O43323	396 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	USP12	O75317	370 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	BCAR3	O75815	825 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	TMIGD3	P0DMS9	266 aa	Predicted RBP	3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	HTR3A	P46098	478 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	HSPA7	P48741	367 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	HSF1	Q00613	529 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	DEUP1	Q05D60	604 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	HDAC1	Q13547	482 aa	Predicted RBP	3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	RALBP1	Q15311	655 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	TRIP6	Q15654	476 aa	Known RBP	3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	SRSF7	Q16629	238 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	SLC35G1	Q2M3R5	365 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	MAP9	Q49MG5	647 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	ZKSCAN2	Q63HK3	967 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	RAP1GAP2	Q684P5	730 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	IL31	Q6EBC2	164 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	ANO7	Q6IWH7	933 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	TMEM65	Q6PI78	240 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	TXLNB	Q8N3L3	684 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	C11orf44	Q8N8P7	122 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	GLIS1	Q8NBF1	620 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	PIGO	Q8TEQ8	1089 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	RSC1A1	Q92681	617 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	PMM1	Q92871	262 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	ZNF566	Q969W8	418 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	PRSS22	Q9GZN4	317 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	VPS45	Q9NRW7	570 aa		3.55	□□□□□ -1.84
CNOT1-223	ENST00000628857	GXYLT2	A0PJZ3	443 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	DNAJC9-AS1	A6NH13	148 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	TTC34	A8MYJ7	566 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	ZSCAN9	O15535	394 aa	Predicted RBP	3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	NCK2	O43639	380 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	SGPL1	O95470	568 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	MBP	P02686	304 aa	Predicted RBP	3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	PRR35	P0CG20	571 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	CYP2D6	P10635	497 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	EPHB2	P29323	1055 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	JAK3	P52333	1124 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	PMS2P11	Q13670	270 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	KCNB1	Q14721	858 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	TWIST1	Q15672	202 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	LONRF1	Q17RB8	773 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	FAM110C	Q1W6H9	321 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	MPEG1	Q2M385	716 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	TMEM119	Q4V9L6	283 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	CEP78	Q5JTW2	689 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	GRHL2	Q6ISB3	625 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	SLC18B1	Q6NT16	456 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	TOGARAM2	Q6ZUX3	1019 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	TTC30A	Q86WT1	665 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	ACRBP	Q8NEB7	543 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	MAFA	Q8NHW3	353 aa	Predicted RBP	3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	MORC4	Q8TE76	937 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	GLMP	Q8WWB7	406 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	TMEM41A	Q96HV5	264 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	C5orf34	Q96MH7	638 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	HS6ST2	Q96MM7	605 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	ADGRE3	Q9BY15	652 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	STK33	Q9BYT3	514 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	NRIP3	Q9NQ35	241 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	ZNF70	Q9UC06	446 aa	Predicted RBP	3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	ASAP1	Q9ULH1	1129 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	SCAF8	Q9UPN6	1271 aa	Known RBP	3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	CEP83	Q9Y592	693 aa		3.54	□□□□□ -1.84
CNOT1-223	ENST00000628857	GOLGA6L3	A6NEY3	463 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	FCHO1	O14526	889 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	CLGN	O14967	610 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	DSCR3	O14972	297 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	RNF8	O76064	485 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	NDST3	O95803	873 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	HARS	P12081	509 aa	Known RBP	3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	PBX1	P40424	430 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	NEK3	P51956	506 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	SEMA3B	Q13214	749 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	MFSD13A	Q14CX5	517 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	RAB30	Q15771	203 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	PFKFB3	Q16875	520 aa	Predicted RBP	3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	MTX3	Q5HYI7	312 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	TMTC4	Q5T4D3	741 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	C11orf87	Q6NUJ2	197 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	ACSM6	Q6P461	480 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	SRL	Q86TD4	932 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	RASGRP3	Q8IV61	690 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	SAMD3	Q8N6K7	520 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	OR52L2P	Q8NGH6	319 aa		3.53	□□□□□ -1.84
CNOT1-223	ENST00000628857	RPL36AL	Q969Q0	106 aa	Known RBP	3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms