RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 ELSPBP1Q96BH3 223 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 ARHGEF26Q96DR7 871 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 ZFRQ96KR1 1074 aaKnown RBP19.65■□□□□ 0.74
MECP2-216ENST00000627864 MCEEQ96PE7 176 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 RPP25Q9BUL9 199 aaKnown RBP19.65■□□□□ 0.74
MECP2-216ENST00000627864 SMOC2Q9H3U7 446 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 FAM204AQ9H8W3 233 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 MRPL47Q9HD33 250 aaKnown RBP19.65■□□□□ 0.74
MECP2-216ENST00000627864 CFAP97Q9P2B7 532 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 STAP1Q9ULZ2 295 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 PCDHA13Q9Y5I0 950 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 NUMBLQ9Y6R0 609 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 SCINQ9Y6U3 715 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 C5orf42Q9H799 3197 aa19.65■□□□□ 0.74
MECP2-216ENST00000627864 SYNJ2BP-COX16A0A087WUM0 186 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 C19orf67A6NJJ6 358 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 ECI2O75521 394 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 CYP1A2P05177 515 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 PDGFRAP16234 1089 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 GPD1P21695 349 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 SULT1E1P49888 294 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 TJAP1Q5JTD0 557 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 VITQ6UXI7 678 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 DDX42Q86XP3 938 aaKnown RBP eCLIP19.64■□□□□ 0.73
MECP2-216ENST00000627864 BPIFB1Q8TDL5 484 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 ADAMTS19Q8TE59 1207 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 WBP2Q969T9 261 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 CFAP57Q96MR6 1250 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 SERPINB11Q96P15 392 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 LRRC3BQ96PB8 259 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 NPY6RQ99463 290 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 KCNK12Q9HB15 430 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 LUC7LQ9NQ29 371 aaKnown RBP19.64■□□□□ 0.73
MECP2-216ENST00000627864 OBP2AQ9NY56 170 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 RRN3Q9NYV6 651 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 COX16Q9P0S2 106 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 IGSF9Q9P2J2 1179 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 SH3BP1Q9Y3L3 701 aa19.64■□□□□ 0.73
MECP2-216ENST00000627864 HBS1LQ9Y450 684 aaKnown RBP19.64■□□□□ 0.73
MECP2-216ENST00000627864 C2CD4BA6NLJ0 364 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 M0QYT0 321 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 NRDCO43847 1150 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 ASGR2P07307 311 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TMEM253P0C7T8 217 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TFE3P19532 575 aaPredicted RBP19.63■□□□□ 0.73
MECP2-216ENST00000627864 SDC4P31431 198 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 GBP1P32455 592 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TBX4P57082 545 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 CCDC173Q0VFZ6 552 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 USP4Q13107 963 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 NME3Q13232 169 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TRIP4Q15650 581 aaPredicted RBP19.63■□□□□ 0.73
MECP2-216ENST00000627864 ZNF77Q15935 545 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 SLC25A52Q3SY17 297 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 YAF2Q8IY57 180 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 ACRBPQ8NEB7 543 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 RIN3Q8TB24 985 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 NXPE3Q969Y0 559 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TBCBQ99426 244 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 NUP85Q9BW27 656 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 DDIT4Q9NX09 232 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 INTUQ9ULD6 942 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 COL6A3P12111 3177 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TICRRQ7Z2Z1 1910 aa19.63■□□□□ 0.73
MECP2-216ENST00000627864 TMEM191CA6NGB0 347 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 SCAMP3O14828 347 aaKnown RBP19.62■□□□□ 0.73
MECP2-216ENST00000627864 STC2O76061 302 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 TCF3P15923 654 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 KPNA1P52294 538 aaPredicted RBP19.62■□□□□ 0.73
MECP2-216ENST00000627864 ATP11AP98196 1134 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 GRM2Q14416 872 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 CCDC14Q49A88 953 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 MFSD6LQ8IWD5 586 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 NT5C3BQ969T7 300 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 PLD4Q96BZ4 506 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 CTTNBP2NLQ9P2B4 639 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 LSM7Q9UK45 103 aaKnown RBP19.62■□□□□ 0.73
MECP2-216ENST00000627864 TLR6Q9Y2C9 796 aa19.62■□□□□ 0.73
MECP2-216ENST00000627864 ARHGAP6O43182 974 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 IRAK2O43187 625 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 IGLV3-25P01717 112 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 PSMC3P17980 439 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 PTPN9P43378 593 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 KRT83P78385 493 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 CCZ1BP86790 482 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 CCZ1P86791 482 aaPredicted RBP19.61■□□□□ 0.73
MECP2-216ENST00000627864 OGDHQ02218 1023 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 DEUP1Q05D60 604 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 CDO1Q16878 200 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 C15orf59Q2T9L4 293 aaPredicted RBP19.61■□□□□ 0.73
MECP2-216ENST00000627864 OTUD1Q5VV17 481 aaPredicted RBP19.61■□□□□ 0.73
MECP2-216ENST00000627864 CC2D1AQ6P1N0 951 aaPredicted RBP19.61■□□□□ 0.73
MECP2-216ENST00000627864 SLC44A3Q8N4M1 653 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 DEPDC1BQ8WUY9 529 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 RNF34Q969K3 372 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 NECAB3Q96P71 396 aaPredicted RBP19.61■□□□□ 0.73
MECP2-216ENST00000627864 DESI2Q9BSY9 194 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 ADAM33Q9BZ11 813 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 TRIM7Q9C029 511 aa19.61■□□□□ 0.73
MECP2-216ENST00000627864 THG1LQ9NWX6 298 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms