RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 KIF9Q9HAQ2 790 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 ABCC13Q9NSE7 274 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 OLA1Q9NTK5 396 aaKnown RBP15.39■□□□□ 0.05
PNKP-221ENST00000627317 TAS2R14Q9NYV8 317 aa15.39■□□□□ 0.05
PNKP-221ENST00000627317 SSU72P8A0A1W2PR75 194 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 H0Y858 1186 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 CAPN9O14815 690 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 ZNF263O14978 683 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 AKR1B10O60218 316 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 HSF2BPO75031 334 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 GLI1P08151 1106 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 GZMAP12544 262 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 ATP5C1P36542 298 aaKnown RBP15.38■□□□□ 0.05
PNKP-221ENST00000627317 SCNN1AP37088 669 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 CDK17Q00537 523 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 SLC6A3Q01959 620 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 MAPK8IP2Q13387 824 aaPredicted RBP15.38■□□□□ 0.05
PNKP-221ENST00000627317 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
PNKP-221ENST00000627317 MON1BQ7L1V2 547 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 SLC26A9Q7LBE3 791 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 TTC16Q8NEE8 873 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 PIWIL1Q96J94 861 aaKnown RBP15.38■□□□□ 0.05
PNKP-221ENST00000627317 CCDC42Q96M95 316 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 CYP2S1Q96SQ9 504 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 POPDC2Q9HBU9 364 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 ASNSD1Q9NWL6 643 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 SMPD4Q9NXE4 827 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 WDR35Q9P2L0 1181 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 RASAL2Q9UJF2 1139 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 DNMT3LQ9UJW3 386 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 NUDT5Q9UKK9 219 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 CPQQ9Y646 472 aa15.38■□□□□ 0.05
PNKP-221ENST00000627317 ZFHX2Q9C0A1 2572 aaPredicted RBP15.37■□□□□ 0.05
PNKP-221ENST00000627317 A0A087X0T9 212 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 MDM4O15151 490 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 RTN2O75298 545 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 GRAP2O75791 330 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 OLFM2O95897 454 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 FAM228BP0C875 321 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 NCAM1P13591 858 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 GSDMDP57764 484 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 YWHAZP63104 245 aaKnown RBP15.37■□□□□ 0.05
PNKP-221ENST00000627317 SLC7A9P82251 487 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 EFEMP1Q12805 493 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 DNAJC24Q6P3W2 148 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 KLHDC10Q6PID8 442 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 MCOLN2Q8IZK6 566 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 MAML2Q8IZL2 1156 aaPredicted RBP15.37■□□□□ 0.05
PNKP-221ENST00000627317 ZNF276Q8N554 614 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 CELF5Q8N6W0 485 aaKnown RBP15.37■□□□□ 0.05
PNKP-221ENST00000627317 BPIFB1Q8TDL5 484 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 CHFRQ96EP1 664 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 TRIM11Q96F44 468 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 ZFYVE19Q96K21 471 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 CHP1Q99653 195 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 RNF38Q9H0F5 515 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 NHEJ1Q9H9Q4 299 aaPredicted RBP15.37■□□□□ 0.05
PNKP-221ENST00000627317 TDP1Q9NUW8 608 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 FAM86C1Q9NVL1 165 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 MARCH2Q9P0N8 246 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 ARHGAP26Q9UNA1 814 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 PIAS3Q9Y6X2 628 aa15.37■□□□□ 0.05
PNKP-221ENST00000627317 FAM170BA6NMN3 283 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 PROB1E7EW31 1015 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 STK25O00506 426 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 DAB1O75553 588 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 TBX18O95935 607 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 FTLP02792 175 aaPredicted RBP15.36■□□□□ 0.05
PNKP-221ENST00000627317 RPS9P46781 194 aaKnown RBP15.36■□□□□ 0.05
PNKP-221ENST00000627317 RNASE9P60153 205 aaKnown RBP15.36■□□□□ 0.05
PNKP-221ENST00000627317 PTP4A2Q12974 167 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 USP4Q13107 963 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 ANGPT1Q15389 498 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 TAF5Q15542 800 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 SLC18A3Q16572 532 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 ARHGAP29Q52LW3 1261 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 CCDC122Q5T0U0 273 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 MSANTD2Q6P1R3 559 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 ALKBH5Q6P6C2 394 aaKnown RBP15.36■□□□□ 0.05
PNKP-221ENST00000627317 ZNF852Q6ZMS4 543 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 BEND5Q7L4P6 421 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 PHLDB2Q86SQ0 1253 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 DDX42Q86XP3 938 aaKnown RBP eCLIP15.36■□□□□ 0.05
PNKP-221ENST00000627317 MIB1Q86YT6 1006 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 SH3RF2Q8TEC5 729 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 ZNF653Q96CK0 615 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 VCPIP1Q96JH7 1222 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 FAM83CQ9BQN1 747 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 IRF2BPLQ9H1B7 796 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 METTL5Q9NRN9 209 aaKnown RBP15.36■□□□□ 0.05
PNKP-221ENST00000627317 HELZP42694 1942 aaKnown RBP15.36■□□□□ 0.05
PNKP-221ENST00000627317 TICRRQ7Z2Z1 1910 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 F5P12259 2224 aa15.36■□□□□ 0.05
PNKP-221ENST00000627317 FRYLO94915 3013 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 MYBL1P10243 752 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 IRF1P10914 325 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 TCF3P15923 654 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 NBL1P41271 181 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 GSCP56915 257 aaPredicted RBP15.35■□□□□ 0.05
PNKP-221ENST00000627317 GFPT1Q06210 699 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms