RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GMNCA6NCL1 334 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 HACD1B0YJ81 288 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 I3L4J1 428 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 NDUFAB1O14561 156 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 TMEM63AO94886 807 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 FYNP06241 537 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 CHN1P15882 459 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 PHBP35232 272 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 MAP2K2P36507 400 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 MAGEA6P43360 314 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 NR1H3Q13133 447 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 FNBP1LQ5T0N5 605 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 SYPL2Q5VXT5 272 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 OVOS1Q6IE37 1185 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 RTN4RL1Q86UN2 441 aaPredicted RBP22.88■■□□□ 1.25
PNKP-220ENST00000627232 ATP11CQ8NB49 1132 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 QKIQ96PU8 341 aaKnown RBP eCLIP22.88■■□□□ 1.25
PNKP-220ENST00000627232 XPO6Q96QU8 1125 aaKnown RBP22.88■■□□□ 1.25
PNKP-220ENST00000627232 VPS37BQ9H9H4 285 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 PNPLA8Q9NP80 782 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 STARD7Q9NQZ5 370 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 FETUBQ9UGM5 382 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 PCDHB8Q9UN66 801 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 NAALADL1Q9UQQ1 740 aa22.88■■□□□ 1.25
PNKP-220ENST00000627232 SF3B1O75533 1304 aaKnown RBP eCLIP22.88■■□□□ 1.257e-7■■■■■ 86
PNKP-220ENST00000627232 EXOC1LA0A1B0GW35 172 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 YJEFN3A6XGL0 299 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 E7ENQ6 273 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 GOLGA8MH3BSY2 632 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 CAPN9O14815 690 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 LTFP02788 710 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 IBSPP21815 317 aaPredicted RBP22.87■■□□□ 1.25
PNKP-220ENST00000627232 CACNA2D1P54289 1103 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 PITX1P78337 314 aaPredicted RBP22.87■■□□□ 1.25
PNKP-220ENST00000627232 MBTPS1Q14703 1052 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 NCBP2-AS2Q69YL0 99 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 FOXR1Q6PIV2 292 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 GPRIN1Q7Z2K8 1008 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 MDM1Q8TC05 714 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 PYROXD1Q8WU10 500 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 DMAP1Q9NPF5 467 aaPredicted RBP22.87■■□□□ 1.25
PNKP-220ENST00000627232 TMEM30AQ9NV96 361 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 PHF24Q9UPV7 400 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 TCRBV7S3A2A0A539 114 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 TMEM189-UBE2V1I3L0A0 370 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 ARVCFO00192 962 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 GCATO75600 419 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 DGKIO75912 1065 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 FAM107AO95990 144 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 GOT1P17174 413 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 AMPD1P23109 780 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 TSPY1Q01534 308 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 GBE1Q04446 702 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 GAD2Q05329 585 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 SCAPQ12770 1279 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 SLC10A2Q12908 348 aaPredicted RBP22.87■■□□□ 1.25
PNKP-220ENST00000627232 PAN2Q504Q3 1202 aaKnown RBP22.87■■□□□ 1.25
PNKP-220ENST00000627232 EFHC2Q5JST6 749 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 PM20D1Q6GTS8 502 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 CCDC13Q8IYE1 715 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 URGCPQ8TCY9 931 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 RNF139Q8WU17 664 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 CCT8L2Q96SF2 557 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 FTHL17Q9BXU8 183 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 MAGEB5Q9BZ81 275 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 PPANQ9NQ55 473 aaKnown RBP22.87■■□□□ 1.25
PNKP-220ENST00000627232 KANSL3Q9P2N6 904 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 CTNNAL1Q9UBT7 734 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 SLC24A2Q9UI40 661 aa22.87■■□□□ 1.25
PNKP-220ENST00000627232 ZNF189O75820 626 aaPredicted RBP22.86■■□□□ 1.25
PNKP-220ENST00000627232 F9P00740 461 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 USP17L7P0C7H9 530 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 COL6A1P12109 1028 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 DSC1Q08554 894 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 MSS51Q4VC12 460 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 FAM43BQ6ZT52 329 aaPredicted RBP22.86■■□□□ 1.25
PNKP-220ENST00000627232 B4GALNT4Q76KP1 1039 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 TADA2BQ86TJ2 420 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 PYROXD2Q8N2H3 581 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 LINC01599Q8WXQ3 324 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 OLFM3Q96PB7 478 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 TRIM62Q9BVG3 475 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 KLC2Q9H0B6 622 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 ARHGEF4Q9NR80 690 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 RAB6BQ9NRW1 208 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 PIGVQ9NUD9 493 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 DTLQ9NZJ0 730 aa22.86■■□□□ 1.25
PNKP-220ENST00000627232 C5orf60A6NFR6 353 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 ADRA1BP35368 520 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 CCT5P48643 541 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 SEC24CP53992 1094 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 NRLP54845 237 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 GPX6P59796 221 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 NME3Q13232 169 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 CCDC38Q502W7 563 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 NOMO2Q5JPE7 1267 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 KCNT2Q6UVM3 1135 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 BEND5Q7L4P6 421 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 BHLHA9Q7RTU4 235 aa22.85■■□□□ 1.25
PNKP-220ENST00000627232 SLC7A14Q8TBB6 771 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms