RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 C3orf49Q96BT1 292 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 TBATAQ96M53 351 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 PYM1Q9BRP8 204 aaKnown RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 FSD1LQ9BXM9 530 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 ZNF341Q9BYN7 854 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 KRTAP9-8Q9BYQ0 159 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 SAP30LQ9HAJ7 183 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 KCNK9Q9NPC2 374 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 GGA3Q9NZ52 723 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 PDP2Q9P2J9 529 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 NFU1Q9UMS0 254 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 LZTS1Q9Y250 596 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 ZBTB1Q9Y2K1 713 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 NPIPB8E9PQR5 432 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 CES2O00748 559 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 SH3BP5O60239 455 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 ENGP17813 658 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 CYP2C18P33260 490 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 GRIA3P42263 894 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 DIO1P49895 249 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 MRPS35P82673 323 aaKnown RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 SEMA3BQ13214 749 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 DNASE1L3Q13609 305 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 SMAD1Q15797 465 aaKnown RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 TAF12Q16514 161 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 PLAC9Q5JTB6 97 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 C16orf89Q6UX73 402 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 MMS22LQ6ZRQ5 1243 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 WDR53Q7Z5U6 358 aaPredicted RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 LRRTM4Q86VH4 590 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 P3H2Q8IVL5 708 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 SIRT6Q8N6T7 355 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 ACTRT2Q8TDY3 377 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 HMGB4Q8WW32 186 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 HERVK_113Q902F9 699 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 NPIPB3Q92617 1050 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 USP13Q92995 863 aaPredicted RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 SDCCAG3Q96C92 435 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 VPS50Q96JG6 964 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 EIF2AK1Q9BQI3 630 aaKnown RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 THAP7Q9BT49 309 aaPredicted RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 BRD8Q9H0E9 1235 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 ABHD16BQ9H3Z7 469 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 VPS45Q9NRW7 570 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 FOXJ2Q9P0K8 574 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 CCNL1Q9UK58 526 aaPredicted RBP4.69□□□□□ -1.66
CDR1-202ENST00000625883 AMFRQ9UKV5 643 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 PCDHB2Q9Y5E7 798 aa4.69□□□□□ -1.66
CDR1-202ENST00000625883 CCDC187A0A096LP49 1063 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 FAM90A20PA6NIJ5 464 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 EFCAB8A8MWE9 144 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 TISP43B9A030 160 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 E7EVH7 732 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 EYA2O00167 538 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 ZNF202O95125 648 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 MBPP02686 304 aaPredicted RBP4.68□□□□□ -1.66
CDR1-202ENST00000625883 DLDP09622 509 aaKnown RBP4.68□□□□□ -1.66
CDR1-202ENST00000625883 EBLN1P0CF75 366 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 TNFRSF1AP19438 455 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 FPR3P25089 353 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 CNTFP26441 200 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 SERPINA4P29622 427 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 ACTR2P61160 394 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 RPS6KA2Q15349 733 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 AAK1Q2M2I8 961 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 ANKRD45Q5TZF3 282 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 CCDC70Q6NSX1 233 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 ANKRD16Q6P6B7 361 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 ZNF627Q7L945 461 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 PNPLA1Q8N8W4 532 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 PNISRQ8TF01 805 aaKnown RBP4.68□□□□□ -1.66
CDR1-202ENST00000625883 ASB12Q8WXK4 309 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 CPT1BQ92523 772 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 LARP4BQ92615 738 aaKnown RBP4.68□□□□□ -1.66
CDR1-202ENST00000625883 PDLIM2Q96JY6 352 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 EIF3CQ99613 913 aaKnown RBP4.68□□□□□ -1.66
CDR1-202ENST00000625883 MAF1Q9H063 256 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 CYP4F11Q9HBI6 524 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 RIC8AQ9NPQ8 531 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 FBXO28Q9NVF7 368 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 NDUFAF4Q9P032 175 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 MGAT4CQ9UBM8 478 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 KCND3Q9UK17 655 aa4.68□□□□□ -1.66
CDR1-202ENST00000625883 UBE2J1Q9Y385 318 aaPredicted RBP4.68□□□□□ -1.66
CDR1-202ENST00000625883 A0A1B0GVC2 190 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 MATN3O15232 486 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 SUV39H1O43463 412 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 TMPRSS11DO60235 418 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 PRAMEF2O60811 474 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 FZD7O75084 574 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 KRT38O76015 456 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 PDE8BO95263 885 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 LARGE1O95461 756 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 TTLL1O95922 423 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 POLBP06746 335 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 THBS4P35443 961 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 AVPR1BP47901 424 aa4.67□□□□□ -1.66
CDR1-202ENST00000625883 AARSP49588 968 aaKnown RBP eCLIP4.67□□□□□ -1.66
CDR1-202ENST00000625883 PAPOLAP51003 745 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms