RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 RGPD5Q99666 1765 aa9.02□□□□□ -0.96
PCDH15-233ENST00000621708 E5RJQ4 531 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 DAB1O75553 588 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 ATP5C1P36542 298 aaKnown RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CDH8P55286 799 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CDK16Q00536 496 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 HSDL1Q3SXM5 330 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 IFNL1Q8IU54 200 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 RNPEPQ9H4A4 650 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 GPATCH2LQ9NWQ4 482 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CD274Q9NZQ7 290 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 PLA2G4CQ9UP65 541 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 ZNF510Q9Y2H8 683 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 XPO1O14980 1071 aaKnown RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CD52P31358 61 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 DLG4P78352 724 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 TAF11Q15544 211 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SLC24A5Q71RS6 500 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 HTR3CQ8WXA8 447 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CNGB3Q9NQW8 809 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 NMRK1Q9NWW6 199 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 TRPC5OSA6NMA1 111 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 IGSF6O95976 241 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SLURP2P0DP57 97 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CHN1P15882 459 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 KRT4P19013 534 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 HSD17B3P37058 310 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 TUBP50607 506 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 ECM1Q16610 540 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SPPL2BQ8TCT7 592 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 ACSF2Q96CM8 615 aaPredicted RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 ZIM3Q96PE6 472 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 STN1Q9H668 368 aaKnown RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SMARCAL1Q9NZC9 954 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CHORDC1Q9UHD1 332 aaPredicted RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 DNMT3LQ9UJW3 386 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SYCE1LA8MT33 242 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 DNALI1O14645 258 aaPredicted RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 CCDC130P13994 396 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 BDNFP23560 247 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 PRKAA2P54646 552 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 HIST2H2ACQ16777 129 aaPredicted RBP9.02□□□□□ -0.97
PCDH15-233ENST00000621708 HECTD3Q5T447 861 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 SCARA3Q6AZY7 606 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 HIST2H2AA3Q6FI13 130 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 COLGALT1Q8NBJ5 622 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 TEX12Q9BXU0 123 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 ATXN3LQ9H3M9 355 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 RBPJLQ9UBG7 517 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 DUSP10Q9Y6W6 482 aa9.02□□□□□ -0.97
PCDH15-233ENST00000621708 TRAV19A0A0A6YYK7 116 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SUPT3HB4E1H0 165 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SUPT3HO75486 399 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 JCHAINP01591 159 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 TSHRP16473 764 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 MIPP30301 263 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 MGAT5Q09328 741 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 KCNMA1Q12791 1236 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SLC29A2Q14542 456 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 STARD3Q14849 445 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SPANXN3Q5MJ09 141 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 PPP1R15BQ5SWA1 713 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 GJC2Q5T442 439 aaPredicted RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 C9orf57Q5W0N0 161 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ERAP2Q6P179 960 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SLC26A11Q86WA9 606 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 FBXO36Q8NEA4 188 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ATXN7L3BQ96GX2 97 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 EPC1Q9H2F5 836 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 RBM22Q9NW64 420 aaKnown RBP eCLIP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 PKD2L2Q9NZM6 624 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SEPT3Q9UH03 358 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 RBP1P09455 135 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 CYP2A6P11509 494 aaPredicted RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 CHRM3P20309 590 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SHROOM1Q2M3G4 852 aaPredicted RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 DNAL1Q4LDG9 190 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 NUP93Q8N1F7 819 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 BLOC1S5Q8TDH9 187 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 C7orf43Q8WVR3 580 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 BAP1Q92560 729 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 NCLNQ969V3 563 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 FICDQ9BVA6 458 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 MARCH2Q9P0N8 246 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 COL20A1Q9P218 1284 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 DOLKQ9UPQ8 538 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 TISP43B9A030 160 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 SYNCRIPO60506 623 aaKnown RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 HTR7P34969 479 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 MAMLD1Q13495 774 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 PTK2BQ14289 1009 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 EEF1DP3Q658K8 133 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 HIBCHQ6NVY1 386 aaPredicted RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 DENND1BQ6P3S1 775 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 VSTM1Q6UX27 236 aa9.01□□□□□ -0.97
PCDH15-233ENST00000621708 TACO1Q9BSH4 297 aaKnown RBP9.01□□□□□ -0.97
PCDH15-233ENST00000621708 ZCCHC2Q9C0B9 1178 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms