RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SGPL1O95470 568 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 IMPDH2P12268 514 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 NCF1P14598 390 aaPredicted RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 ELNP15502 786 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 CYP11B1P15538 503 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 AMD1P17707 334 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 BDNFP23560 247 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 RARRES1P49788 294 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 ADGRA1Q86SQ6 560 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 ERLEC1Q96DZ1 483 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 PRMT1Q99873 361 aaKnown RBP10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 ABCG4Q9H172 646 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 TAF6LQ9Y6J9 622 aa10.08□□□□□ -0.8
CLTCL1-211ENST00000621271 AK9Q5TCS8 1911 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 COL5A2P05997 1499 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 A0A1W2PQJ5 194 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 MGAT4DA6NG13 374 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 PJA2O43164 708 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CXCL14O95715 111 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 PCNAP12004 261 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 TAL1P17542 331 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 HECTD3Q5T447 861 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CXorf40AQ8TE69 158 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SYN2Q92777 582 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 OLFM3Q96PB7 478 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 C2orf49Q9BVC5 232 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 KRCC1Q9NPI7 259 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 GID8Q9NWU2 228 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SMARCAL1Q9NZC9 954 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CHORDC1Q9UHD1 332 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 TDRKHQ9Y2W6 561 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 GNG14A0A1W2PPG7 69 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 LACTBL1A8MY62 500 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 OPLAHO14841 1288 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SUPT7LO94864 414 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 GLUD1P00367 558 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CSH1P0DML2 217 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CSH2P0DML3 217 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CCND1P24385 295 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CHKAP35790 457 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CHI3L1P36222 383 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SEC24CP53992 1094 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 ZDHHC17Q8IUH5 632 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SERAC1Q96JX3 654 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 GEMIN8Q9NWZ8 242 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 AHSPQ9NZD4 102 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 MARCH2Q9P0N8 246 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 USP18Q9UMW8 372 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 USP15Q9Y4E8 981 aaPredicted RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 TCP11X1B4DZS4 312 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CA12O43570 354 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 MAPTP10636 758 aaKnown RBP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 TCF3P15923 654 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 MAGEA4P43358 317 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 AP2B1P63010 937 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 OCA2Q04671 838 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 PCBP1Q15365 356 aaKnown RBP eCLIP10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 FBXO22Q8NEZ5 403 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 TNIP2Q8NFZ5 429 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC2A14Q8TDB8 520 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 LRRC40Q9H9A6 602 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SDR42E2A6NKP2 422 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 H3BQF6 201 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 CYP2A7P20853 494 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SERPINA4P29622 427 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 C21orf59P57076 290 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 MYBPC2Q14324 1141 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC9A5Q14940 896 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 KDM7AQ6ZMT4 941 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 HORMAD1Q86X24 394 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 LZTR1Q8N653 840 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 C3orf20Q8ND61 904 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 SGSM3Q96HU1 749 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 BRD9Q9H8M2 597 aa10.07□□□□□ -0.8
CLTCL1-211ENST00000621271 PDE2AO00408 941 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 GSNP06396 782 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 DAB2P98082 770 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 MROH9Q5TGP6 573 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 FOXR1Q6PIV2 292 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 C16orf59Q7L2K0 433 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 TRPM8Q7Z2W7 1104 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 SLC44A2Q8IWA5 706 aaPredicted RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CCDC33Q8N5R6 958 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 EXD1Q8NHP7 514 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 DIS3LQ8TF46 1054 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 COPS5Q92905 334 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 LENG9Q96B70 501 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 NAT9Q9BTE0 207 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 SOHLH2Q9NX45 425 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 CYP39A1Q9NYL5 469 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 HPS5Q9UPZ3 1129 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 PCDHB9Q9Y5E1 797 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 RPTORQ8N122 1335 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 ZNF839A8K0R7 811 aa10.06□□□□□ -0.8
CLTCL1-211ENST00000621271 FAM110CQ1W6H9 321 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms