RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MEX3CQ5U5Q3 659 aaKnown RBP6.02□□□□□ -1.45
VPS29-212ENST00000621131 NXNQ6DKJ4 435 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 PTCHD4Q6ZW05 846 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 ZBTB9Q96C00 473 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 CCDC17Q96LX7 622 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 VN1R3Q9BXE9 311 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 VPS16Q9H269 839 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 PRKRIP1Q9H875 184 aaPredicted RBP6.02□□□□□ -1.45
VPS29-212ENST00000621131 TUBA8Q9NY65 449 aaPredicted RBP6.02□□□□□ -1.45
VPS29-212ENST00000621131 KLHL13Q9P2N7 655 aa6.02□□□□□ -1.45
VPS29-212ENST00000621131 XIRP1Q702N8 1843 aaKnown RBP6.02□□□□□ -1.45
VPS29-212ENST00000621131 EVC2Q86UK5 1308 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 MYOM1P52179 1685 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 LOC102723971A0A1B0GUV8 181 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 E5RJQ4 531 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 H7C4K7 107 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 CD3EAPO15446 510 aaKnown RBP6.01□□□□□ -1.45
VPS29-212ENST00000621131 SPRY2O43597 315 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 SRGAP2O75044 1071 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 A1BGP04217 495 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 ATP5F1P24539 256 aaPredicted RBP6.01□□□□□ -1.45
VPS29-212ENST00000621131 IL1R2P27930 398 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 MMP13P45452 471 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 FMO1Q01740 532 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 C3orf38Q5JPI3 329 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 CNGA4Q8IV77 575 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 TCEAL8Q8IYN2 117 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 MAGEB6Q8N7X4 407 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 ZBTB45Q96K62 511 aaPredicted RBP6.01□□□□□ -1.45
VPS29-212ENST00000621131 FYTTD1Q96QD9 318 aaKnown RBP6.01□□□□□ -1.45
VPS29-212ENST00000621131 TESK2Q96S53 571 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 ELOVL5Q9NYP7 299 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 COL20A1Q9P218 1284 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 KNSTRNQ9Y448 316 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 EID1Q9Y6B2 187 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 KNDC1Q76NI1 1749 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 DIP2AQ14689 1571 aa6.01□□□□□ -1.45
VPS29-212ENST00000621131 DLC1Q96QB1 1528 aa6□□□□□ -1.45
VPS29-212ENST00000621131 KRTAP29-1A8MX34 341 aaPredicted RBP6□□□□□ -1.45
VPS29-212ENST00000621131 PROB1E7EW31 1015 aa6□□□□□ -1.45
VPS29-212ENST00000621131 RGS10O43665 173 aa6□□□□□ -1.45
VPS29-212ENST00000621131 RRP9O43818 475 aaKnown RBP6□□□□□ -1.45
VPS29-212ENST00000621131 RASAL1O95294 804 aa6□□□□□ -1.45
VPS29-212ENST00000621131 IGKV2-30P06310 120 aa6□□□□□ -1.45
VPS29-212ENST00000621131 APEHP13798 732 aaKnown RBP6□□□□□ -1.45
VPS29-212ENST00000621131 BRAFP15056 766 aa6□□□□□ -1.45
VPS29-212ENST00000621131 KLRC1P26715 233 aa6□□□□□ -1.45
VPS29-212ENST00000621131 NR4A2P43354 598 aa6□□□□□ -1.45
VPS29-212ENST00000621131 DIO1P49895 249 aa6□□□□□ -1.45
VPS29-212ENST00000621131 ZNF750Q32MQ0 723 aa6□□□□□ -1.45
VPS29-212ENST00000621131 CACHD1Q5VU97 1274 aa6□□□□□ -1.45
VPS29-212ENST00000621131 LINC01465Q8N7H1 131 aa6□□□□□ -1.45
VPS29-212ENST00000621131 DHX36Q9H2U1 1008 aaKnown RBP6□□□□□ -1.45
VPS29-212ENST00000621131 GAR1Q9NY12 217 aaKnown RBP6□□□□□ -1.45
VPS29-212ENST00000621131 NINLQ9Y2I6 1382 aa6□□□□□ -1.45
VPS29-212ENST00000621131 YTHDC2Q9H6S0 1430 aaKnown RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 BRD4O60885 1362 aaPredicted RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 RASSF9O75901 435 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 ATF7P17544 494 aaPredicted RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 PTDSS1P48651 473 aaKnown RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 COPB1P53618 953 aaKnown RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 ARHGEF7Q14155 803 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 PPP2R5AQ15172 486 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 Q4G0T1 1027 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 C4orf46Q504U0 113 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 ARHGAP29Q52LW3 1261 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 RNF220Q5VTB9 566 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 PNISRQ8TF01 805 aaKnown RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 FAM118BQ9BPY3 351 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 EFHD1Q9BUP0 239 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 STK31Q9BXU1 1019 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 CHST8Q9H2A9 424 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 TRIM36Q9NQ86 728 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 MGAT4CQ9UBM8 478 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 AFF4Q9UHB7 1163 aaKnown RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 DDX20Q9UHI6 824 aaKnown RBP5.99□□□□□ -1.45
VPS29-212ENST00000621131 LRP6O75581 1613 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 ASXL1Q8IXJ9 1541 aa5.99□□□□□ -1.45
VPS29-212ENST00000621131 ROBO1Q9Y6N7 1651 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 LRPPRCP42704 1394 aaKnown RBP5.98□□□□□ -1.45
VPS29-212ENST00000621131 TMEM2Q9UHN6 1383 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 TMEM232C9JQI7 657 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 H3BNC9 293 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 AGPSO00116 658 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 GCATO75600 419 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 BMP15O95972 392 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 MYF5P13349 255 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 HGFP14210 728 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 PHKG2P15735 406 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 CREB1P16220 341 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 ZKSCAN1P17029 563 aaPredicted RBP5.98□□□□□ -1.45
VPS29-212ENST00000621131 GATMP50440 423 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 RPS16P62249 146 aaKnown RBP5.98□□□□□ -1.45
VPS29-212ENST00000621131 MAPK7Q13164 816 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 RABEP1Q15276 862 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 CHST15Q7LFX5 561 aaPredicted RBP5.98□□□□□ -1.45
VPS29-212ENST00000621131 KRT73Q86Y46 540 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 PRSS3P2Q8NHM4 247 aa5.98□□□□□ -1.45
VPS29-212ENST00000621131 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms