RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SEPT4O43236 478 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 PIGRP01833 764 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 ZCCHC18P0CG32 403 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 MYL2P10916 166 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 SERPINB6P35237 376 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 VEGFBP49765 207 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CDK16Q00536 496 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 DSG1Q02413 1049 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 MBTD1Q05BQ5 628 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 MTM1Q13496 603 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 LAMB3Q13751 1172 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 C1orf220Q5T0J3 134 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 RNF220Q5VTB9 566 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 RFX6Q8HWS3 928 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 NME8Q8N427 588 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TRPV1Q8NER1 839 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 SEMA4DQ92854 862 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 FAM111AQ96PZ2 611 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 EPAS1Q99814 870 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM121Q9BTD3 319 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 THTPAQ9BU02 230 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 APOL6Q9BWW8 343 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 FAM192AQ9GZU8 254 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 VPS11Q9H270 941 aa7.25□□□□□ -1.25
SRGAP3-213ENST00000618999 PLXNB2O15031 1838 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MYADML2A6NDP7 307 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 LIASO43766 372 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CALCAP01258 141 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 HLA-DRAP01903 254 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CD19P15391 556 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 POLR2BP30876 1174 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 VCPP55072 806 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MCL1Q07820 350 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ARHGEF6Q15052 776 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SH2D4BQ5SQS7 431 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 RGS9BPQ6ZS82 235 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 GALNT15Q8N3T1 639 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 UTP4Q969X6 686 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MTBPQ96DY7 904 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ZNF333Q96JL9 665 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MTG1Q9BT17 334 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ZWILCHQ9H900 591 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 IFT122Q9HBG6 1241 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 PCDH9Q9HC56 1237 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 IRAK4Q9NWZ3 460 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 LOXHD1Q8IVV2 1947 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 M0QZ92 97 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TNNC2P02585 160 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 KITP10721 976 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ARF4P18085 180 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TBXAS1P24557 533 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 IVDP26440 423 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SSTR1P30872 391 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SLC18A1P54219 525 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 PRSS12P56730 875 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 RASA2Q15283 850 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 DUOXA2Q1HG44 320 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MDH1BQ5I0G3 518 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SPDYAQ5MJ70 313 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MARCH8Q5T0T0 291 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 IZUMO2Q6UXV1 221 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CCDC81Q6ZN84 652 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 RASSF3Q86WH2 238 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TMEM35BQ8NCS4 154 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 FBXO36Q8NEA4 188 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 OR5B17Q8NGF7 314 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 HELQQ8TDG4 1101 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MCEEQ96PE7 176 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CDT1Q9H211 546 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SRRDQ9UH36 339 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 LNPEPQ9UIQ6 1025 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CHMP2BQ9UQN3 213 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TNFSF13BQ9Y275 285 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 Q9Y3F1 56 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 STYXL1Q9Y6J8 313 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 PCNTO95613 3336 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 GPR25O00155 361 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 FCHO1O14526 889 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ALOX15BO15296 676 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 GSC2O15499 205 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 IQCF3P0C7M6 154 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CXCL8P10145 99 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 ETS1P14921 441 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 PSMA2P25787 234 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CCND3P30281 292 aaPredicted RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TAS2R40P59535 323 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 CDC42EP1Q00587 391 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 OCRLQ01968 901 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 AP1B1Q10567 949 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 FASTKD3Q14CZ7 662 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SURF1Q15526 300 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TRMT5Q32P41 509 aaKnown RBP7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TFDP3Q5H9I0 405 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 SPOPLQ6IQ16 392 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 MFSD7Q6UXD7 560 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 DSTYKQ6XUX3 929 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 TSHZ1Q6ZSZ6 1077 aa7.24□□□□□ -1.25
SRGAP3-213ENST00000618999 LRRC6Q86X45 466 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms