RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 A0A0C4DFX4 3053 aa5.08□□□□□ -1.6
CUL3-216ENST00000617432 C5orf67F2Z3F1 127 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 F8W810 466 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 PER2O15055 1255 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 MAGEB2O15479 319 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 B4GALT5O43286 388 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 MARCH6O60337 910 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 USO1O60763 962 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 GLP2RO95838 553 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 SRGAP2CP0DJJ0 459 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 XBP1P17861 261 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 KCNA5P22460 613 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 GLRA2P23416 452 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 GJB2P29033 226 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 CDC25AP30304 524 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 PTGS2P35354 604 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 BMPR1AP36894 532 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 TECP42680 631 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 RARRES1P49788 294 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 POLGP54098 1239 aaPredicted RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 CAPSQ13938 189 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 TRIM29Q14134 588 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 TBR1Q16650 682 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 XKR9Q5GH70 373 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 TTC38Q5R3I4 469 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 EP400NLQ6ZTU2 488 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 GAREM2Q75VX8 874 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 KCNK18Q7Z418 384 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 RBM23Q86U06 439 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 FAM178BQ8IXR5 827 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 C4orf32Q8N8J7 132 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 COLGALT1Q8NBJ5 622 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 FBXO18Q8NFZ0 1043 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 RDM1Q8NG50 284 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 SPPL3Q8TCT6 385 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 LRRC15Q8TF66 581 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 POF1BQ8WVV4 589 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 PRPF31Q8WWY3 499 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 MRPL38Q96DV4 380 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 CPB2Q96IY4 423 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 FAM20AQ96MK3 541 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 CASD1Q96PB1 797 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 UHRF1Q96T88 793 aaPredicted RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 HSD17B14Q9BPX1 270 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 KIFC3Q9BVG8 833 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 FTHL17Q9BXU8 183 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 DHX33Q9H6R0 707 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 UBE2ZQ9H832 354 aaPredicted RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 TYW1Q9NV66 732 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 PIN4Q9Y237 131 aaKnown RBP5.07□□□□□ -1.6
CUL3-216ENST00000617432 HES2Q9Y543 173 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 NUB1Q9Y5A7 615 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 PCDHB7Q9Y5E2 793 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 SQORQ9Y6N5 450 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 MUC3AQ02505 3323 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 MYO9BQ13459 2157 aa5.07□□□□□ -1.6
CUL3-216ENST00000617432 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 TBX3O15119 743 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 SUSD5O60279 629 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 RECKO95980 971 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 OR52Z1P0C646 297 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 HOXA11P31270 313 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 FAM189BP81408 668 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 MRPS5P82675 430 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 LAMTOR4Q0VGL1 99 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 TUSC3Q13454 348 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 PCOLCEQ15113 449 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 RABEP1Q15276 862 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 SPOUT1Q5T280 376 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 PLPP4Q5VZY2 271 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 SLC24A5Q71RS6 500 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 MRGPREQ86SM8 312 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 CATSPER3Q86XQ3 398 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 NOSTRINQ8IVI9 506 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 C4orf19Q8IY42 314 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 FAM177A1Q8N128 213 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 FAM184AQ8NB25 1140 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 RNF149Q8NC42 400 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 ATXN2LQ8WWM7 1075 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 AUTS2Q8WXX7 1259 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 RABGGTAQ92696 567 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 PLIN2Q99541 437 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 LLPHQ9BRT6 129 aaKnown RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 APOL5Q9BWW9 433 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 VN1R3Q9BXE9 311 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 GCOM2Q9BZD3 368 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 POLR3FQ9H1D9 316 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 ZSWIM4Q9H7M6 989 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 ATP6V0A4Q9HBG4 840 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 AGPAT5Q9NUQ2 364 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 TMEM161AQ9NX61 479 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 ACTR10Q9NZ32 417 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 DNAJB4Q9UDY4 337 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 BARX2Q9UMQ3 279 aaPredicted RBP5.06□□□□□ -1.6
CUL3-216ENST00000617432 PCDHA12Q9UN75 941 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 INPP5FQ9Y2H2 1132 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 COL4A3BPQ9Y5P4 624 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 HIDE1A8MVS5 230 aa5.06□□□□□ -1.6
CUL3-216ENST00000617432 E9PMD0 336 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms