RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 DSC1Q08554 894 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 ACAP1Q15027 740 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 SLC25A52Q3SY17 297 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 BOLA3Q53S33 107 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 FAM171BQ6P995 826 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 RSPO2Q6UXX9 243 aaPredicted RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 SLC39A5Q6ZMH5 540 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 BBS12Q6ZW61 710 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 MREGQ8N565 214 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 GIPC2Q8TF65 315 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 SMARCD1Q96GM5 515 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 SUSD3Q96L08 255 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 CASD1Q96PB1 797 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 CDC42EP4Q9H3Q1 356 aaKnown RBP8.11□□□□□ -1.11
NEK3-207ENST00000617054 POPDC2Q9HBU9 364 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 UBN1Q9NPG3 1134 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 MED4Q9NPJ6 270 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 SFMBT1Q9UHJ3 866 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 LRFN2Q9ULH4 789 aa8.11□□□□□ -1.11
NEK3-207ENST00000617054 CAND2O75155 1236 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 ENDOD1O94919 500 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 RPL17P18621 184 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 ITIH2P19823 946 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 RBL1P28749 1068 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 DEUP1Q05D60 604 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 BFSP2Q13515 415 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 ZDHHC17Q8IUH5 632 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 SPATA2LQ8IUW3 424 aaPredicted RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEK3-207ENST00000617054 CCDC89Q8N998 374 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 URGCPQ8TCY9 931 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 EPS8L3Q8TE67 593 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 CENPIQ92674 756 aaPredicted RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 SLCO2A1Q92959 643 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 SH3GL2Q99962 352 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 HOMER3Q9NSC5 361 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 DDIT4Q9NX09 232 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 MTRF1LQ9UGC7 380 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 FEZ2Q9UHY8 353 aaPredicted RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 NUP205Q92621 2012 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 APOC4-APOC2K7ER74 178 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 KCNN4O15554 427 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 MSI1O43347 362 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 AVILO75366 819 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 APOC2P02655 101 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 SKIP12755 728 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 RPL22P35268 128 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 SLC11A1P49279 550 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 SNX16P57768 344 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 TAZQ16635 292 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 LONRF1Q17RB8 773 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 KRT71Q3SY84 523 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 CCDC38Q502W7 563 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 VARS2Q5ST30 1063 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 BSPRYQ5W0U4 402 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 PRSS55Q6UWB4 352 aaPredicted RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 BHLHA9Q7RTU4 235 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 ANKMY2Q8IV38 441 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 THEM5Q8N1Q8 247 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 PKMYT1Q99640 499 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 PABPC3Q9H361 631 aaKnown RBP8.1□□□□□ -1.11
NEK3-207ENST00000617054 TMEM161AQ9NX61 479 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEK3-207ENST00000617054 CTNNAL1Q9UBT7 734 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 OGDHLQ9ULD0 1010 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 SQORQ9Y6N5 450 aa8.1□□□□□ -1.11
NEK3-207ENST00000617054 FRMPD3Q5JV73 1810 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 RIPK2O43353 540 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 LTFP02788 710 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 ALDH2P05091 517 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 NOS2P35228 1153 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 PTPN9P43378 593 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 CTCFP49711 727 aaPredicted RBP8.09□□□□□ -1.11
NEK3-207ENST00000617054 BASP1P80723 227 aaKnown RBP8.09□□□□□ -1.11
NEK3-207ENST00000617054 TSPY1Q01534 308 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 GLIPR1L2Q4G1C9 344 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 RHBDF2Q6PJF5 856 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 MAP7D3Q8IWC1 876 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 CSPG4P5Q96PW8 444 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 LGMNQ99538 433 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 SIK2Q9H0K1 926 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 CRISPLD1Q9H336 500 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 PRDM5Q9NQX1 630 aaPredicted RBP8.09□□□□□ -1.11
NEK3-207ENST00000617054 SAGE1Q9NXZ1 904 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 WHRNQ9P202 907 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 TBK1Q9UHD2 729 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 NOVA2Q9UNW9 492 aaKnown RBP8.09□□□□□ -1.11
NEK3-207ENST00000617054 CHD9Q3L8U1 2897 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 APOL1O14791 398 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 MCF2LO15068 1137 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 TBX18O95935 607 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 CYP11A1P05108 521 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 ITGAVP06756 1048 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 SLC5A3P53794 718 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 USP46P62068 366 aa8.09□□□□□ -1.11
NEK3-207ENST00000617054 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms