RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 HDAC2Q92769 488 aaKnown RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 EGFL8Q99944 293 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 TBC1D22BQ9NU19 505 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 IRAK3Q9Y616 596 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 C1orf167Q5SNV9 1468 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 PLA2G4BP0C869 781 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 THRAP10827 490 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 MLLT6P55198 1093 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 BROXQ5VW32 411 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 ELMO2Q96JJ3 720 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 ERGIC2Q96RQ1 377 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF717Q9BY31 904 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 PSMC3IPQ9P2W1 217 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 YWHAZP63104 245 aaKnown RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 GFPT1Q06210 699 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 NCAPHQ15003 741 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 RASAL3Q86YV0 1011 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CMTR2Q8IYT2 770 aaKnown RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 MEIOBQ8N635 442 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 PDPRQ8NCN5 879 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 FAR2Q96K12 515 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 SPOCK3Q9BQ16 436 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 TRIM36Q9NQ86 728 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 LMCD1Q9NZU5 365 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 MON2Q7Z3U7 1717 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 COBLO75128 1261 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 TRIM3O75382 744 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CRKP46108 304 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 ERFP50548 548 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CDH4P55283 916 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 COPZ1P61923 177 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 NT5DC1Q5TFE4 455 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 MMS19Q96T76 1030 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 SLC8A2Q9UPR5 921 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 H3BM21 787 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 M0QX08 132 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 EML1O00423 815 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 SRGAP2O75044 1071 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CYP2D6P10635 497 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 ILF2Q12905 390 aaKnown RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CAMK1Q14012 370 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 MCPH1Q8NEM0 835 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 ALG5Q9Y673 324 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CLOCKO15516 846 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 TCN1P20061 433 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 SLC29A2Q14542 456 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 DLGAP5Q15398 846 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 PKN1Q16512 942 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 EFHC1Q5JVL4 640 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 TCEAL6Q6IPX3 200 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 KCNF1Q9H3M0 494 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 FARSAQ9Y285 508 aaKnown RBP9.52□□□□□ -0.89
COL12A1-211ENST00000615798 SLIT3O75094 1523 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 NR1H2P55055 460 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 PLA2G4EQ3MJ16 856 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 MACC1Q6ZN28 852 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 CEP295NLQ96MC4 621 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 NRBP2Q9NSY0 501 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 NEDD4P46934 1319 aa9.52□□□□□ -0.89
COL12A1-211ENST00000615798 OR7A10O76100 309 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 SRGNP10124 158 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ITGA9Q13797 1035 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 CCDC137Q6PK04 289 aaKnown RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 RNF135Q8IUD6 432 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 TBC1D15Q8TC07 691 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 MKNK1Q9BUB5 465 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ROPN1BQ9BZX4 212 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ROPN1Q9HAT0 212 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 TNPO2O14787 897 aaKnown RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 GNAO1P09471 354 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 PSMA2P25787 234 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 TWF2Q6IBS0 349 aaKnown RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 NEMP1O14524 444 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ATP9BO43861 1147 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 EPHA10Q5JZY3 1008 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 RD3Q7Z3Z2 195 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 LBHD1Q9BQE6 289 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 OSBPL6Q9BZF3 934 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 FSBPO95073 299 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 WEE1P30291 646 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 NKX1-1Q15270 411 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ACMSDQ8TDX5 336 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 IL1RL2Q9HB29 575 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 RXFP1Q9HBX9 757 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 DCP1AQ9NPI6 582 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 SNX12Q9UMY4 172 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 CEP170BQ9Y4F5 1589 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ZNF197O14709 1029 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 RAB5BP61020 215 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 NDNQ99608 321 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 HERC2P3Q9BVR0 1158 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 PHACTR1Q9C0D0 580 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 WNT8AQ9H1J5 351 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 SH3BP1Q9Y3L3 701 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 CCNE2O96020 404 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 ECHS1P30084 290 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 GRK3P35626 688 aa9.51□□□□□ -0.89
COL12A1-211ENST00000615798 GUCA1AP43080 201 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms