RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SPATA31D3P0C874 917 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 PLOD1Q02809 727 aaPredicted RBP12.16□□□□□ -0.46
CDH5-208ENST00000614547 SPATA31D4Q6ZUB0 917 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SNX31Q8N9S9 440 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 CXorf38Q8TB03 319 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SLC44A1Q8WWI5 657 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 ARHGEF38Q9NXL2 777 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 ASB3Q9Y575 518 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 TPP1O14773 563 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 AKAP10O43572 662 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
CDH5-208ENST00000614547 NR3C2P08235 984 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SDC4P31431 198 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 ZC3H12AQ5D1E8 599 aaKnown RBP12.16□□□□□ -0.46
CDH5-208ENST00000614547 SLFN12LQ6IEE8 588 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 PID1Q7Z2X4 250 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 TDRPQ86YL5 185 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 RXFP2Q8WXD0 754 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 NIF3L1Q9GZT8 377 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 RPL26L1Q9UNX3 145 aaKnown RBP12.16□□□□□ -0.46
CDH5-208ENST00000614547 SSX2IPQ9Y2D8 614 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 PLLPQ9Y342 182 aa12.16□□□□□ -0.46
CDH5-208ENST00000614547 MED7O43513 233 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 ERVK-10P10266 1014 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 MCF2P10911 925 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 IL1R2P27930 398 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 EPHA3P29320 983 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 GRIA1P42261 906 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 PHKA2P46019 1235 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 ZACNQ401N2 412 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 PLEKHA7Q6IQ23 1121 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDH5-208ENST00000614547 BHLHE22Q8NFJ8 381 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 HSPBAP1Q96EW2 488 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 PAIP1Q9H074 479 aaKnown RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 RSAD1Q9HA92 442 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 KLHL8Q9P2G9 620 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 PAIP2BQ9ULR5 123 aaKnown RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 DRG1Q9Y295 367 aaKnown RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 SNCAIPQ9Y6H5 919 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 CACNA1SQ13698 1873 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 ZNF862O60290 1169 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 FAM58BPP0C7Q3 252 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 CSH1P0DML2 217 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 CSH2P0DML3 217 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 PSMC3P17980 439 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 IFRD2Q12894 506 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 SPP2Q13103 211 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 KRT72Q14CN4 511 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 Q3C1V9 767 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 NADK2Q4G0N4 442 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 ITPRIPL1Q6GPH6 555 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 SNRNP48Q6IEG0 339 aaKnown RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 ACAD11Q709F0 780 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 CLVS1Q8IUQ0 354 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 RYBPQ8N488 228 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 SYTL5Q8TDW5 730 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 GATA6Q92908 595 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 ZNF669Q96BR6 464 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 DCUN1D1Q96GG9 259 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 TASP1Q9H6P5 420 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 SLC38A10Q9HBR0 1119 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
CDH5-208ENST00000614547 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 ADAMTS6Q9UKP5 1117 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 SLC39A10Q9ULF5 831 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 RPS6KL1Q9Y6S9 549 aa12.15□□□□□ -0.46
CDH5-208ENST00000614547 ARHGEF37A1IGU5 675 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 SAC3D1A6NKF1 404 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 H0YCG3 227 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 MAGEC1O60732 1142 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 LRCH4O75427 683 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 CCNE2O96020 404 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 MMP8P22894 467 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 RGS2P41220 211 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 RPL5P46777 297 aaKnown RBP12.15□□□□□ -0.47
CDH5-208ENST00000614547 SLC12A2P55011 1212 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.47
CDH5-208ENST00000614547 PODNQ7Z5L7 613 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 OLIG1Q8TAK6 271 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 ZFAND2BQ8WV99 257 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 FAM136AQ96C01 138 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 CDH22Q9UJ99 828 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 FEM1BQ9UK73 627 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 POMPQ9Y244 141 aa12.15□□□□□ -0.47
CDH5-208ENST00000614547 NUP98P52948 1817 aa12.14□□□□□ -0.47
CDH5-208ENST00000614547 SIN3BO75182 1162 aa12.14□□□□□ -0.47
CDH5-208ENST00000614547 LDHAP00338 332 aaKnown RBP12.14□□□□□ -0.47
CDH5-208ENST00000614547 APOEP02649 317 aa12.14□□□□□ -0.47
CDH5-208ENST00000614547 AMHP03971 560 aa12.14□□□□□ -0.47
CDH5-208ENST00000614547 CCND2P30279 289 aa12.14□□□□□ -0.47
CDH5-208ENST00000614547 SERPINB8P50452 374 aa12.14□□□□□ -0.47
CDH5-208ENST00000614547 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms