RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TXLNGYQ9BZA5 131 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 HIPK3Q9H422 1215 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 NRDE2Q9H7Z3 1164 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 POPDC2Q9HBU9 364 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 PRDM5Q9NQX1 630 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 MTMR10Q9NXD2 777 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 NINJ2Q9NZG7 142 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 WHRNQ9P202 907 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TTLL3Q9Y4R7 772 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SCAMP3O14828 347 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 TMEM63AO94886 807 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ITGAVP06756 1048 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 APRTP07741 180 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CPB1P15086 417 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CA8P35219 290 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 NOS2P35228 1153 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ACTN2P35609 894 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ARL4AP40617 200 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 GRIA1P42261 906 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 IFNAR2P48551 515 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 OLIG2Q13516 323 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TFDP2Q14188 446 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SLMAPQ14BN4 828 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SLC25A52Q3SY17 297 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TRIM60Q495X7 471 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CTXN3Q4LDR2 81 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 OTUD1Q5VV17 481 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 HIBCHQ6NVY1 386 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 RWDD4Q6NW29 188 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 RHBDF2Q6PJF5 856 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 PRSS55Q6UWB4 352 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 FAM126BQ8IXS8 530 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CYP4X1Q8N118 509 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TMEM86AQ8N2M4 240 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD42Q8N9B4 389 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 GIPC2Q8TF65 315 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 CPT1BQ92523 772 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 NKD2Q969F2 451 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 SMARCD1Q96GM5 515 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 RUNDC3BQ96NL0 473 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 AGAP3Q96P47 875 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 SEPT5Q99719 369 aaPredicted RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 DNAI2Q9GZS0 605 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 TKTL2Q9H0I9 626 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 KCNK9Q9NPC2 374 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 XPO7Q9UIA9 1087 aaKnown RBP3.57□□□□□ -1.84
LIG4-205ENST00000614526 CHMP2BQ9UQN3 213 aa3.57□□□□□ -1.84
LIG4-205ENST00000614526 MYO18AQ92614 2054 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 MFSD11O43934 449 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TTC4O95801 387 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ALDH2P05091 517 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ACRP10323 421 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SLC11A1P49279 550 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 IRAK1P51617 712 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SLC5A3P53794 718 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 GSCP56915 257 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 USP46P62068 366 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 NKX3-2P78367 333 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 CRADDP78560 199 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 LMNB2Q03252 620 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SPARCL1Q14515 664 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ACAP1Q15027 740 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 EFTUD2Q15029 972 aaKnown RBP eCLIP3.56□□□□□ -1.84
LIG4-205ENST00000614526 NOMO1Q15155 1222 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 MGAT5BQ3V5L5 792 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 VARS2Q5ST30 1063 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 RSPO2Q6UXX9 243 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 MIB1Q86YT6 1006 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ZDHHC17Q8IUH5 632 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 COLGALT2Q8IYK4 626 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 TTC13Q8NBP0 860 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 RNF139Q8WU17 664 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SLCO2A1Q92959 643 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 EXOC4Q96A65 974 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 SUSD3Q96L08 255 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 NPY6RQ99463 290 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 ACBD6Q9BR61 282 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 WDCPQ9H6R7 721 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 NMUR1Q9HB89 426 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DMAP1Q9NPF5 467 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 UBP1Q9NZI7 540 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 STAP1Q9ULZ2 295 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 CCDC78A2IDD5 438 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 HHLA1C9JL84 531 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 EEF2KO00418 725 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 DPYSL4O14531 572 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 USP12O75317 370 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 METTL18O95568 372 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 F7P08709 466 aaPredicted RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 DNAJB2P25686 324 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 EPHB2P29323 1055 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 RDXP35241 583 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 ADRA1BP35368 520 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 PTPN9P43378 593 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DMTNQ08495 405 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 DUSP4Q13115 394 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 BFSP2Q13515 415 aa3.56□□□□□ -1.84
LIG4-205ENST00000614526 AUHQ13825 339 aaKnown RBP3.56□□□□□ -1.84
LIG4-205ENST00000614526 ARHGEF6Q15052 776 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms