RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 SH2D3AQ9BRG2 576 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 NUDT22Q9BRQ3 303 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 RNF26Q9BY78 433 aaPredicted RBP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 PRSS22Q9GZN4 317 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 BTBD3Q9Y2F9 522 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 CEP83Q9Y592 693 aa5.88□□□□□ -1.47
SCAMP1-205ENST00000614488 PODXLO00592 558 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 FYB1O15117 783 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 VIPP01282 170 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 MBPP02686 304 aaPredicted RBP5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 PECAM1P16284 738 aaPredicted RBP5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 YY1P25490 414 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 HSPA7P48741 367 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 BTKQ06187 659 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 DAZAP2Q15038 168 aaPredicted RBP5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 MPEG1Q2M385 716 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 AWAT1Q58HT5 328 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 OVCA2Q8WZ82 227 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 GJA10Q969M2 543 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 GRAMD1AQ96CP6 724 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 SGCZQ96LD1 299 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 SAP30LQ9HAJ7 183 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 TNFRSF18Q9Y5U5 241 aa5.87□□□□□ -1.47
SCAMP1-205ENST00000614488 WDR91A4D1P6 747 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 DSCR3O14972 297 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 ZSCAN9O15535 394 aaPredicted RBP5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 DRD1P21728 446 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 MATN1P21941 496 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 MMP8P22894 467 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 GALNSP34059 522 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 JAK3P52333 1124 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 SLC14A1Q13336 389 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 MAP9Q49MG5 647 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 ARHGAP15Q53QZ3 475 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 TMEM196Q5HYL7 178 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 CC2D1BQ5T0F9 858 aaKnown RBP5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 SRLQ86TD4 932 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 SVIPQ8NHG7 77 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 OSR1Q8TAX0 266 aaPredicted RBP5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 ELAC2Q9BQ52 826 aaKnown RBP5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 ADGRE3Q9BY15 652 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 STK33Q9BYT3 514 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 ZNF700Q9H0M5 742 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 KLHL13Q9P2N7 655 aa5.86□□□□□ -1.47
SCAMP1-205ENST00000614488 E5RJQ4 531 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 GLP2RO95838 553 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 SFPQP23246 707 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 DUSP1P28562 367 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 ARHGAP25P42331 645 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 RAE1P78406 368 aaKnown RBP5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 TMTC4Q5T4D3 741 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 ANO7Q6IWH7 933 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 CCDC146Q8IYE0 955 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 FAM186BQ8IYM0 893 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 C16orf71Q8IYS4 520 aaPredicted RBP5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 SMG7Q92540 1137 aaKnown RBP5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 MAP4K1Q92918 833 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 RPL36ALQ969Q0 106 aaKnown RBP5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 KIAA1191Q96A73 305 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 PRR11Q96HE9 360 aaPredicted RBP5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 SLC29A3Q9BZD2 475 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 NLRC4Q9NPP4 1024 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 HELLSQ9NRZ9 838 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 ABHD10Q9NUJ1 306 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 DTNAQ9Y4J8 743 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 PCDHGB2Q9Y5G2 931 aa5.85□□□□□ -1.47
SCAMP1-205ENST00000614488 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 FCHO1O14526 889 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 DHHO43323 396 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 PLA2G6O60733 806 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 ATP5F1P24539 256 aaPredicted RBP5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 ZNF81P51508 661 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 WDR5P61964 334 aaKnown RBP5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 SEC23BQ15437 767 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 RAB30Q15771 203 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 CNGA4Q8IV77 575 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 ZNF778Q96MU6 729 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 FNIP2Q9P278 1114 aa5.84□□□□□ -1.47
SCAMP1-205ENST00000614488 KCNU1A8MYU2 1149 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 IFIT2P09913 472 aaKnown RBP5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 SRGAP2BP0DMP2 458 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 TACR3P29371 465 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 IGHMBP2P38935 993 aaKnown RBP5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 GSTM5P46439 218 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 GHRHRQ02643 423 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 SEMA3BQ13214 749 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 BFSP2Q13515 415 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 PFKFB3Q16875 520 aaPredicted RBP5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 CCDC144NLQ6NUI1 221 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 SLC2A7Q6PXP3 512 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 RASGRP3Q8IV61 690 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 OR52L2PQ8NGH6 319 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 DENND1AQ8TEH3 1009 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 PIGOQ8TEQ8 1089 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 NUAK2Q9H093 628 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 PCDHB2Q9Y5E7 798 aa5.83□□□□□ -1.48
SCAMP1-205ENST00000614488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.82□□□□□ -1.48
SCAMP1-205ENST00000614488 GXYLT2A0PJZ3 443 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms