RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 CDH24Q86UP0 819 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 CDKL3Q8IVW4 592 aaPredicted RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 DENND6AQ8IWF6 608 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 ZSCAN29Q8IWY8 852 aaPredicted RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 CCDC36Q8IYA8 594 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 ARHGAP24Q8N264 748 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 ARFGAP2Q8N6H7 521 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 KBTBD3Q8NAB2 608 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 TRPV1Q8NER1 839 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 CLHC1Q8NHS4 586 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 ZNF461Q8TAF7 563 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 GTF3C2Q8WUA4 911 aaPredicted RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 NAT14Q8WUY8 206 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 SCFD1Q8WVM8 642 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 MRPS27Q92552 414 aaKnown RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 SGF29Q96ES7 293 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 CNOT6LQ96LI5 555 aaKnown RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 RIT2Q99578 217 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 OLFM1Q99784 485 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 ACAT2Q9BWD1 397 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 BRIP1Q9BX63 1249 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 GON7Q9BXV9 100 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 SYNDIG1Q9H7V2 258 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 MARCH7Q9H992 704 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.74□□□□□ -1.49
CCL16-206ENST00000613642 RC3H2Q9HBD1 1191 aaKnown RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 PLGRKTQ9HBL7 147 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 SRA1Q9HD15 236 aaKnown RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 CD209Q9NNX6 404 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 C1orf112Q9NSG2 853 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 NUDT15Q9NV35 164 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 GDAP2Q9NXN4 497 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 CYTH4Q9UIA0 394 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 SALL4Q9UJQ4 1053 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 RCOR1Q9UKL0 485 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 PCOLCE2Q9UKZ9 415 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 NOB1Q9ULX3 412 aaKnown RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 SPATA2Q9UM82 520 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 VPS4AQ9UN37 437 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 RPL26L1Q9UNX3 145 aaKnown RBP5.74□□□□□ -1.49
CCL16-206ENST00000613642 GAB2Q9UQC2 676 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 POLHQ9Y253 713 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 DTNAQ9Y4J8 743 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 KCNMB2Q9Y691 235 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 FHOD3Q2V2M9 1422 aa5.74□□□□□ -1.49
CCL16-206ENST00000613642 ADAMTS12P58397 1594 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 HECW2Q9P2P5 1572 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 ADGRL1O94910 1474 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 A0A1B0GTQ1 180 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 OR5K3A6NET4 321 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 DCDC2CA8MYV0 355 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 ZNF879B4DU55 563 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 H7C0C1 242 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 LAD1O00515 517 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 RASGRF2O14827 1237 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 THAP12O43422 761 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 KCNQ2O43526 872 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 TRAPPC3O43617 180 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 BUB1O43683 1085 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 KRT86O43790 486 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 RBBP9O75884 186 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 PIGNO95427 931 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 PLATP00750 562 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 POLBP06746 335 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 PFKMP08237 780 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 QDPRP09417 244 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 FAM228BP0C875 321 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 HSD3B1P14060 373 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 RAG1P15918 1043 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 FSTP19883 344 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 POU3F3P20264 500 aaPredicted RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 MAPK1P28482 360 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 L1CAMP32004 1257 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 BMI1P35226 326 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 SOX18P35713 384 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 IGHMBP2P38935 993 aaKnown RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 IARSP41252 1262 aaKnown RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 HNMTP50135 292 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 ALDH3A2P51648 485 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 AP2S1P53680 142 aaPredicted RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 AIF1P55008 147 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 NLRP11P59045 1033 aaKnown RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 ZNF280AP59817 542 aaPredicted RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 CCZ1BP86790 482 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 CCZ1P86791 482 aaPredicted RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 PPARAQ07869 468 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 LRMPQ12912 555 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 CALCOCO2Q13137 446 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 EFTUD2Q15029 972 aaKnown RBP eCLIP5.73□□□□□ -1.49
CCL16-206ENST00000613642 SLC39A14Q15043 492 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 MAPK6Q16659 721 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 ABCB5Q2M3G0 1257 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 HSP90AA4PQ58FG1 418 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 SLC45A4Q5BKX6 768 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 EFHC1Q5JVL4 640 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 FAM102BQ5T8I3 360 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 FAM109BQ6ICB4 259 aaPredicted RBP5.73□□□□□ -1.49
CCL16-206ENST00000613642 WDR73Q6P4I2 378 aa5.73□□□□□ -1.49
CCL16-206ENST00000613642 CLEC2AQ6UVW9 174 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms