RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 NCAM1P13591 858 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SLC11A2P49281 568 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 DGKGP49619 791 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 PGFP49763 221 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TPM4P67936 248 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 ARID5AQ03989 594 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SIM2Q14190 667 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 GAS6Q14393 721 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 DMC1Q14565 340 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 GJB7Q6PEY0 223 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 ASCL5Q7RTU5 278 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TMEM25Q86YD3 366 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 DENND1CQ8IV53 801 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 GPR161Q8N6U8 529 aaKnown RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 ZNF557Q8N988 423 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 UCMAQ8WVF2 138 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SERPINB11Q96P15 392 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 LSM14BQ9BX40 385 aaKnown RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 VPS16Q9H269 839 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 EPC1Q9H2F5 836 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 FBRSL1Q9HCM7 1045 aaKnown RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TAB2Q9NYJ8 693 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 MARK1Q9P0L2 795 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 CACNG3O60359 315 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 LILRB5O75023 590 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 LATS1O95835 1130 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TIE1P35590 1138 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 GPD2P43304 727 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 FNTBP49356 437 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 DGKEP52429 567 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 MPPE1Q53F39 396 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 C10orf76Q5T2E6 689 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TOGARAM2Q6ZUX3 1019 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 C11orf74Q86VG3 221 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 WDR5BQ86VZ2 330 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 CPXM2Q8N436 756 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 TERB1Q8NA31 727 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 DDI1Q8WTU0 396 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 NELL1Q92832 810 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SPAG5Q96R06 1193 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SFMBT1Q9UHJ3 866 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
CBWD1-221ENST00000613355 SMG5Q9UPR3 1016 aaKnown RBP12.88□□□□□ -0.35
CBWD1-221ENST00000613355 BECN2A8MW95 431 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 AXIN1O15169 862 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 APOEP02649 317 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 GBP1P32455 592 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 SLC6A11P48066 632 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 TBX4P57082 545 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 MTA1Q13330 715 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 SYCP1Q15431 976 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 FILIP1LQ4L180 1135 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 MIIPQ5JXC2 388 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 CAVIN1Q6NZI2 390 aaKnown RBP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 MSANTD2Q6P1R3 559 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 Q6ZNB5 142 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 SCUBE3Q8IX30 993 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 ZNF513Q8N8E2 541 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 NDRG1Q92597 394 aaKnown RBP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 BHMTQ93088 406 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 PPP1R13BQ96KQ4 1090 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 IRX2Q9BZI1 471 aaPredicted RBP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 POPDC2Q9HBU9 364 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 FANCLQ9NW38 375 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 AGO1Q9UL18 857 aaKnown RBP12.87□□□□□ -0.35
CBWD1-221ENST00000613355 MMP17Q9ULZ9 603 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 PCDHGC3Q9UN70 934 aa12.87□□□□□ -0.35
CBWD1-221ENST00000613355 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 WDFY4Q6ZS81 3184 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 K7EQS6 105 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 K7ESF4 209 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 NPC1O15118 1278 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 GLI1P08151 1106 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 UCHL3P15374 230 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 YWHAZP63104 245 aaKnown RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 TYRO3Q06418 890 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 RING1Q06587 406 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 PDCLQ13371 301 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 NNTQ13423 1086 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 DRAP1Q14919 205 aaPredicted RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 KRT31Q15323 416 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 TRIP4Q15650 581 aaPredicted RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 ELF2Q15723 593 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 USP39Q53GS9 565 aaKnown RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 CDKAL1Q5VV42 579 aa12.86□□□□□ -0.35
CBWD1-221ENST00000613355 NAIF1Q69YI7 327 aaPredicted RBP12.86□□□□□ -0.35
CBWD1-221ENST00000613355 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms