RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SLC18A2Q05940 514 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 SEPT7Q16181 437 aaKnown RBP15.25■□□□□ 0.03
CDH1-213ENST00000612417 NPNTQ6UXI9 565 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 SH2D5Q6ZV89 423 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 FAM183BPQ6ZVS7 135 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 SESTD1Q86VW0 696 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 MAP7D3Q8IWC1 876 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 TEKT4Q8WW24 435 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 ADAM33Q9BZ11 813 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 SENP6Q9GZR1 1112 aaPredicted RBP15.25■□□□□ 0.03
CDH1-213ENST00000612417 USP29Q9HBJ7 922 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 PAK5Q9P286 719 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 C15orf41Q9Y2V0 281 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 L3MBTL1Q9Y468 752 aa15.25■□□□□ 0.03
CDH1-213ENST00000612417 E5RJQ4 531 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 HNRNPCL1O60812 293 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 CABYRO75952 493 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 PFKMP08237 780 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 T-ENOLP0DO92 83 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 TROVE2P10155 538 aaKnown RBP eCLIP15.24■□□□□ 0.03
CDH1-213ENST00000612417 TGM2P21980 687 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 ELF1P32519 619 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 ETV4P43268 484 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 RASSF2P50749 326 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 NEK3P51956 506 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 PTK7Q13308 1070 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 BOLA3Q53S33 107 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 SH3PXD2AQ5TCZ1 1133 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 UBA3Q8TBC4 463 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 SLC7A6OSQ96CW6 309 aaPredicted RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 THOC1Q96FV9 657 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 APOPT1Q96IL0 206 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 TBCBQ99426 244 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 HMX1Q9NP08 348 aaPredicted RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 SAR1AQ9NR31 198 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 TSPAN16Q9UKR8 245 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 THSD7BQ9C0I4 1608 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 PDCD11Q14690 1871 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 ZNF487B1APH4 448 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 KBTBD13C9JR72 458 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 ANP32DO95626 131 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 IL1BP01584 269 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 C1QAP02745 245 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 MT-ND3P03897 115 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 RPLP2P05387 115 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 IL4RP24394 825 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 TARSP26639 723 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 KBTBD12Q3ZCT8 623 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 ACCSLQ4AC99 568 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 NLRP9Q7RTR0 991 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 ZC3H18Q86VM9 953 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 TAB3Q8N5C8 712 aaPredicted RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 PLD5Q8N7P1 536 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 SMG8Q8ND04 991 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 SLAIN1Q8ND83 568 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 PIWIL1Q96J94 861 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 NT5C1AQ9BXI3 368 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 SLC17A7Q9P2U7 560 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 LNPEPQ9UIQ6 1025 aa15.24■□□□□ 0.03
CDH1-213ENST00000612417 UBQLN1Q9UMX0 589 aaKnown RBP15.24■□□□□ 0.03
CDH1-213ENST00000612417 SMIM28A0A1B0GU29 152 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 LPXNO60711 386 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 PIAS1O75925 651 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 GRK4P32298 578 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 NRLP54845 237 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 C15orf59Q2T9L4 293 aaPredicted RBP15.23■□□□□ 0.03
CDH1-213ENST00000612417 PKDCCQ504Y2 493 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 SLC9A4Q6AI14 798 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 OR6B2Q6IFH4 312 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
CDH1-213ENST00000612417 FAF2Q96CS3 445 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 GLT1D1Q96MS3 346 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 MANSC1Q9H8J5 431 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 NPHS2Q9NP85 383 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 HAO1Q9UJM8 370 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 RPL26L1Q9UNX3 145 aaKnown RBP15.23■□□□□ 0.03
CDH1-213ENST00000612417 IKBKGQ9Y6K9 419 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 BCLAF3A2AJT9 711 aaKnown RBP15.23■□□□□ 0.03
CDH1-213ENST00000612417 H7C0C1 242 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 PPEF2O14830 753 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 XPOTO43592 962 aaKnown RBP15.23■□□□□ 0.03
CDH1-213ENST00000612417 TGDSO95455 350 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 INHBAP08476 426 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 IBSPP21815 317 aaPredicted RBP15.23■□□□□ 0.03
CDH1-213ENST00000612417 ATP5OP48047 213 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 CCNG1P51959 295 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 KRT81Q14533 505 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 ZBTB6Q15916 424 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 CTC1Q2NKJ3 1217 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 CCDC14Q49A88 953 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 RAB6CQ53S08 254 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 PLEKHG4Q58EX7 1191 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 OLFML1Q6UWY5 402 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 EP400NLQ6ZTU2 488 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 DPH6Q7L8W6 267 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 PQLC3Q8N755 202 aa15.23■□□□□ 0.03
CDH1-213ENST00000612417 RAB6CQ9H0N0 254 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms