RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 MYL7Q01449 175 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 GRIN1Q05586 938 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 SCAPQ12770 1279 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 SFSWAPQ12872 951 aaKnown RBP7.55□□□□□ -1.2
CLK4-214ENST00000611575 KCNB1Q14721 858 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 DUOXA1Q1HG43 343 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 UAP1L1Q3KQV9 507 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 EOGTQ5NDL2 527 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 EMC10Q5UCC4 262 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 LMBRD2Q68DH5 695 aaPredicted RBP7.55□□□□□ -1.2
CLK4-214ENST00000611575 PDZD3Q86UT5 571 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 MIB1Q86YT6 1006 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 SLC41A1Q8IVJ1 513 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 ADGRF2Q8IZF7 708 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 CHCHD4Q8N4Q1 142 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 MINDY1Q8N5J2 469 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 FSIP1Q8NA03 581 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 RAD54LQ92698 747 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 DNAJC19Q96DA6 116 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 OTUB2Q96DC9 234 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 ZNF419Q96HQ0 510 aaPredicted RBP7.55□□□□□ -1.2
CLK4-214ENST00000611575 SPACA7Q96KW9 195 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 C8orf48Q96LL4 319 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 ZSCAN31Q96LW9 406 aaPredicted RBP7.55□□□□□ -1.2
CLK4-214ENST00000611575 PLIN2Q99541 437 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 GABRG3Q99928 467 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 TRPC7Q9HCX4 862 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 FSCN3Q9NQT6 498 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 OLFML3Q9NRN5 406 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 IL37Q9NZH6 218 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 CDH9Q9ULB4 789 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 NFE2L3Q9Y4A8 694 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 NUP205Q92621 2012 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 ABCA7Q8IZY2 2146 aa7.55□□□□□ -1.2
CLK4-214ENST00000611575 ASCC3Q8N3C0 2202 aaKnown RBP7.55□□□□□ -1.2
CLK4-214ENST00000611575 PTPRJQ12913 1337 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 E2F8A0AVK6 867 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 SLC9A3R1O14745 358 aaPredicted RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 AP5Z1O43299 807 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 BNIP3LO60238 219 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 ATP2C2O75185 946 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 KLF8O95600 359 aaPredicted RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 FAM163BP0C2L3 166 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 GARTP22102 1010 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 WARSP23381 471 aaKnown RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 GNA15P30679 374 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 DDIT3P35638 169 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 TUBP50607 506 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 CACNA2D1P54289 1103 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 ZNF33AQ06730 810 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 PSMD2Q13200 908 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 ENPP2Q13822 863 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 BYSLQ13895 437 aaKnown RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 POSTNQ15063 836 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 L1TD1Q5T7N2 865 aaKnown RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 SLC36A4Q6YBV0 504 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 C4orf50Q6ZRC1 276 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 DENND5BQ6ZUT9 1274 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 RABEPKQ7Z6M1 372 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 DNASE2BQ8WZ79 361 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 LARP4BQ92615 738 aaKnown RBP7.54□□□□□ -1.2
CLK4-214ENST00000611575 MYLPFQ96A32 169 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 PCED1BQ96HM7 432 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 ARHGEF4Q9NR80 690 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 CALCOCO1Q9P1Z2 691 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 SEL1LQ9UBV2 794 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 AGAP1Q9UPQ3 857 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 CPQQ9Y646 472 aa7.54□□□□□ -1.2
CLK4-214ENST00000611575 ATXN2Q99700 1313 aaKnown RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 FLNBO75369 2602 aaKnown RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 HELZP42694 1942 aaKnown RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 ANAPC1Q9H1A4 1944 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 A0A087WV48 116 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 TCRBV21S2A2A0A5A6 115 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 MYMKA6NI61 221 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 PCNX2A6NKB5 2137 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 OPHN1O60890 802 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 HUS1O60921 280 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 TULP3O75386 442 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 TACC1O75410 805 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 IGLV3-19P01714 112 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 APODP05090 189 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 ZNF883P0CG24 379 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 ADH5P11766 374 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 LONP1P36776 959 aaKnown RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 CASP5P51878 434 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 RBP5P82980 135 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 GFPT1Q06210 699 aaPredicted RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 RESTQ13127 1097 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 MAPRE1Q15691 268 aaKnown RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 ARMCX6Q7L4S7 300 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 SFR1Q86XK3 245 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 DDX42Q86XP3 938 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLK4-214ENST00000611575 SPATA2LQ8IUW3 424 aaPredicted RBP7.53□□□□□ -1.2
CLK4-214ENST00000611575 TERB1Q8NA31 727 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 OR2I1PQ8NGU4 316 aa7.53□□□□□ -1.2
CLK4-214ENST00000611575 MYCBPAPQ8TBZ2 947 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms