RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 DPY19L2P1Q6NXN4 242 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 C11orf57Q6ZUT1 292 aaPredicted RBP12.86□□□□□ -0.35
CTSA-210ENST00000606000 CEP68Q76N32 757 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
CTSA-210ENST00000606000 FAM160A2Q8N612 972 aaPredicted RBP12.86□□□□□ -0.35
CTSA-210ENST00000606000 GAB3Q8WWW8 586 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 ZNF606Q8WXB4 792 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 CDK5RAP1Q96SZ6 601 aaKnown RBP12.86□□□□□ -0.35
CTSA-210ENST00000606000 TUBGCP2Q9BSJ2 902 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 NDST4Q9H3R1 872 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 ST7Q9NRC1 585 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 TAB2Q9NYJ8 693 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 DEC1Q9P2X7 70 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 DACH1Q9UI36 760 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 STRIP2Q9ULQ0 834 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 CLEC4EQ9ULY5 219 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 INVSQ9Y283 1065 aa12.86□□□□□ -0.35
CTSA-210ENST00000606000 A0A0A0MRY4 1105 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 GTPBP10A4D1E9 387 aaKnown RBP12.85□□□□□ -0.35
CTSA-210ENST00000606000 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 AXIN1O15169 862 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 RPP40O75818 363 aaKnown RBP12.85□□□□□ -0.35
CTSA-210ENST00000606000 APBB3O95704 486 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 FYNP06241 537 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 DGKEP52429 567 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 MRPS21P82921 87 aaKnown RBP12.85□□□□□ -0.35
CTSA-210ENST00000606000 SPEM2Q0P670 501 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 KCNMA1Q12791 1236 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 STILQ15468 1287 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 TRIP4Q15650 581 aaPredicted RBP12.85□□□□□ -0.35
CTSA-210ENST00000606000 CRY1Q16526 586 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 EGFLAMQ63HQ2 1017 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 RBM43Q6ZSC3 357 aaKnown RBP12.85□□□□□ -0.35
CTSA-210ENST00000606000 KBTBD6Q86V97 674 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 FAM114A1Q8IWE2 563 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 SCML4Q8N228 414 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 CAMKK1Q8N5S9 505 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 MDGA1Q8NFP4 955 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 TSTD1Q8NFU3 115 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 RNF139Q8WU17 664 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 SHC3Q92529 594 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 PIWIL1Q96J94 861 aaKnown RBP12.85□□□□□ -0.35
CTSA-210ENST00000606000 ACOX2Q99424 681 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 ABCC13Q9NSE7 274 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 DNAJC12Q9UKB3 198 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 RAB23Q9ULC3 237 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 NFE2L3Q9Y4A8 694 aa12.85□□□□□ -0.35
CTSA-210ENST00000606000 E5RJQ4 531 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 PES1O00541 588 aaKnown RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 TSPAN3O60637 253 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 PENKP01210 267 aaPredicted RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 LTFP02788 710 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 TGM1P22735 817 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 TNFRSF4P43489 277 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 DGKGP49619 791 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 SGSHP51688 502 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 CCDC6Q16204 474 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 TCP11X2Q5H9J9 407 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 LAIR1Q6GTX8 287 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 MSANTD2Q6P1R3 559 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 ENOSF1Q7L5Y1 443 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 SCUBE3Q8IX30 993 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 ZNF513Q8N8E2 541 aaPredicted RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 ADAM32Q8TC27 787 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 IRGQQ8WZA9 623 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 PLD4Q96BZ4 506 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 HSFY1Q96LI6 401 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 PLCB1Q9NQ66 1216 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 OLA1Q9NTK5 396 aaKnown RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 GMEB2Q9UKD1 530 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 NAALADL1Q9UQQ1 740 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 FHOD1Q9Y613 1164 aa12.84□□□□□ -0.35
CTSA-210ENST00000606000 MUC22E2RYF6 1773 aaPredicted RBP12.84□□□□□ -0.35
CTSA-210ENST00000606000 ZFHX2Q9C0A1 2572 aaPredicted RBP12.83□□□□□ -0.35
CTSA-210ENST00000606000 CCDC163A0A0D9SF12 145 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 GOLGA6L7A0A1B0GV03 622 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 TCRBV21S2A2A0A5A6 115 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 FOXN3O00409 490 aaPredicted RBP12.83□□□□□ -0.36
CTSA-210ENST00000606000 PAPSS1O43252 624 aaPredicted RBP12.83□□□□□ -0.36
CTSA-210ENST00000606000 MED7O43513 233 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 BCKDHBP21953 392 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 CNR2P34972 360 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 KLK7P49862 253 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.36
CTSA-210ENST00000606000 PDCLQ13371 301 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 GEN1Q17RS7 908 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 SLC47A2Q86VL8 602 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 RASSF3Q86WH2 238 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 FAM217AQ8IXS0 508 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 WDTC1Q8N5D0 677 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 FRMD1Q8N878 549 aa12.83□□□□□ -0.36
CTSA-210ENST00000606000 C1orf131Q8NDD1 294 aaKnown RBP12.83□□□□□ -0.36
CTSA-210ENST00000606000 DQX1Q8TE96 717 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms