RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
SSBP4-208ENST00000600628 FAM126AQ9BYI3 521 aaPredicted RBP9.2□□□□□ -0.94
SSBP4-208ENST00000600628 VPS16Q9H269 839 aa9.2□□□□□ -0.94
SSBP4-208ENST00000600628 LRRC4Q9HBW1 653 aa9.2□□□□□ -0.94
SSBP4-208ENST00000600628 CD248Q9HCU0 757 aa9.2□□□□□ -0.94
SSBP4-208ENST00000600628 OLA1Q9NTK5 396 aaKnown RBP9.2□□□□□ -0.94
SSBP4-208ENST00000600628 RBM12Q9NTZ6 932 aaKnown RBP9.2□□□□□ -0.94
SSBP4-208ENST00000600628 MARCH2Q9P0N8 246 aa9.2□□□□□ -0.94
SSBP4-208ENST00000600628 NOCTQ9UK39 431 aaKnown RBP9.2□□□□□ -0.94
SSBP4-208ENST00000600628 HBS1LQ9Y450 684 aaKnown RBP9.2□□□□□ -0.94
SSBP4-208ENST00000600628 MUC22E2RYF6 1773 aaPredicted RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CKAP5Q14008 2032 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CEP250Q9BV73 2442 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CCDC163A0A0D9SF12 145 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 PRR23AA6NEV1 266 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 ANTXRLA6NF34 631 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 E5RJQ4 531 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SART1O43290 800 aaKnown RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 LATS1O95835 1130 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 GLI1P08151 1106 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CISD3P0C7P0 127 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 KRT5P13647 590 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CYP11B1P15538 503 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 KIR2DL1P43626 348 aaPredicted RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CXCL12P48061 93 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SLC6A11P48066 632 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 RGS7P49802 495 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 KLK7P49862 253 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 CCR3P51677 355 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 BPIFB4P59827 614 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SATB1Q01826 763 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 PTK2Q05397 1052 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 GRSF1Q12849 480 aaKnown RBP eCLIP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 ARTNQ5T4W7 220 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 FYB2Q5VWT5 728 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 ZC3H14Q6PJT7 736 aaKnown RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 TSSK4Q6SA08 328 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 BNIPLQ7Z465 357 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 NOP9Q86U38 636 aaKnown RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SFTPA1Q8IWL2 248 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SCUBE3Q8IX30 993 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 AOPEPQ8N6M6 819 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SUMF1Q8NBK3 374 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 USP33Q8TEY7 942 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 PLD4Q96BZ4 506 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 SLC2A13Q96QE2 648 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 IRX2Q9BZI1 471 aaPredicted RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 DCLK3Q9C098 648 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 RTN4Q9NQC3 1192 aaKnown RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 ASNSD1Q9NWL6 643 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 TJP2Q9UDY2 1190 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 AGO1Q9UL18 857 aaKnown RBP9.19□□□□□ -0.94
SSBP4-208ENST00000600628 ZNF510Q9Y2H8 683 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 STARD13Q9Y3M8 1113 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 R4GN57 208 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 DOCK4Q8N1I0 1966 aa9.19□□□□□ -0.94
SSBP4-208ENST00000600628 A0A1B0GTH6 734 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SCAMP3O14828 347 aaKnown RBP9.18□□□□□ -0.94
SSBP4-208ENST00000600628 TEX33O43247 280 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 THAP12O43422 761 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ADH1CP00326 375 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ADH5P11766 374 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 LCP1P13796 627 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 CHRNB2P17787 502 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 PTMSP20962 102 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 HOXC13P31276 330 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SCNN1AP37088 669 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 PBX1P40424 430 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ZNF165P49910 485 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 GAD2Q05329 585 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 EFEMP1Q12805 493 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 PPP2R5DQ14738 602 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SYCP1Q15431 976 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 HSF5Q4G112 596 aaPredicted RBP9.18□□□□□ -0.94
SSBP4-208ENST00000600628 PTPN20Q4JDL3 420 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SYPL2Q5VXT5 272 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 OLFML1Q6UWY5 402 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SYT13Q7L8C5 426 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SLC26A9Q7LBE3 791 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ARCQ7LC44 396 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 KIAA0907Q7Z7F0 614 aaPredicted RBP9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ZNF677Q86XU0 584 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 CREBRFQ8IUR6 639 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 FMNL3Q8IVF7 1028 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SIX6OS1Q8N1H7 587 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 CHD5Q8TDI0 1954 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 KCNV2Q8TDN2 545 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ATRIPQ8WXE1 791 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 EXOC4Q96A65 974 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
SSBP4-208ENST00000600628 LSM14BQ9BX40 385 aaKnown RBP9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ADAM33Q9BZ11 813 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 TTYH3Q9C0H2 523 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 NAT10Q9H0A0 1025 aaKnown RBP9.18□□□□□ -0.94
SSBP4-208ENST00000600628 ZSCAN32Q9NX65 697 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SLC27A6Q9Y2P4 619 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 SH3BP1Q9Y3L3 701 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 PCDHGA2Q9Y5H1 932 aa9.18□□□□□ -0.94
SSBP4-208ENST00000600628 A0A1W2PQC6 194 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms